Drosophila virilis: 6633904
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Entry
6633904 CDS
T01066
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6633904 (Caper)
Spliceosome [BR:
dvi03041
]
Common components
Common spliceosomal components
General mRNP proteins
6633904 (Caper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
6633904
NCBI-ProteinID:
XP_002057597
UniProt:
B4M8Z4
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All DBs
Position
4:26214951..26220108
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AA seq
599 aa
AA seq
DB search
MAEDFDVEAMLEAPYQKNNVSAGSAGRGRGRSSGSDSAGHDDNDEDYTENGQRSSNGNKK
RSHRSRSRSGSRHKRSKDQEREKERGTERSSYRDKDRDRERDREHRDHRYRDVAKRSSRT
RDERPSDDRRGGGSGRNDRDRRSRDRRGGSKTMQRDAERKRSRSRDRRHRSRSRDQQRKR
MSPIRERRRSQSRSKDTNRRRTSYSPRPYGGRGRGGGGRSPPNGVGDRTPPTELSPEERD
ARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALAL
GLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPMRLYVGSLHFNITEDMLRGIF
EPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKVGNVTERL
DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQ
QQTPSIATQCFILSNMFDPRTETNPTWDTDVREDVLDECAKHGGVLHIHVDTVSPTGTVY
VKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHSMFPDAISAVDLIASTRKNADD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagactttgacgttgaagcaatgctagaagcaccctaccaaaaaaacaacgtc
agtgcgggcagcgctggacgaggacgcgggcgcagcagcggcagcgacagtgccggccac
gatgacaacgatgaggattacactgaaaacggacagcgctcctcgaatggcaacaaaaag
cgcagccatcgctcgcgtagtcgtagtggctcacgtcacaagcgctccaaggatcaggaa
cgtgaaaaggagcgtggcactgaacgcagcagctatcgtgacaaggatagagacagagag
cgtgatcgtgagcatcgggatcatcgttatcgcgatgtcgccaagcgcagcagtcgcaca
cgcgatgagcgccccagcgatgacagacgtggcggcggcagtggacgtaacgatcgtgat
cgtcgctcgcgcgatcgtcgaggcggcagcaaaaccatgcagcgcgatgccgagcgtaag
cgcagtcgctctcgcgacaggcgccatcgcagtcgctcccgtgatcagcaacgcaaacgc
atgagtcccatacgtgaacgtcggcgaagtcagtcgcgctccaaagacacaaatcgccgt
cggaccagctactcaccacgaccatacggtggacgcggacgtggtggtggcggcaggtcg
ccaccgaatggcgtcggggatcgcacaccacccaccgagctcagtcctgaggagcgcgat
gcacgcaccgttttctgcattcagctgtcgcaacgagtgcgcgcacgcgacttggaggag
ttcttctccagcgtcggcaaggtgcgcgatgtgcggctgattacgtgcaacaagactaaa
cgcttcaaaggcattgcgtacattgagttcgaggatcccgaatcagtggcgctagcactc
ggattgtcgggccaacggctgctgggcgttcccataatggtgcagcacacgcaggccgaa
aaaaatagactgcaaagtgctccgccaccgttccagcccaaagctcacacaggacccatg
cgactttatgttggctcgctgcacttcaacatcaccgaggacatgttgcgtggtatattc
gagccatttggcaaaattgatgttattcagctgattatggacactgagacgggtcgttcc
aaaggctacggctttattacgtatcacaacgctgacgatgccaaaaaggctttggagcaa
ctgaacggctttgaactggcgggccgtcccatgaaagtgggcaatgttacggagcggcta
gacatgaatactagttcactggacactgatgaaatggatcgcagcggcatagatcttggc
gccacaggacgacttcagctcatgtttaagctggcagagggcgccggtctggccgtgcca
caggcagcggccaatgcgctacttgccacagcgccgcagccagcacctttgcagcagcaa
cagcagacgccatccatagctacacagtgctttatactgtccaacatgtttgatccgcgc
accgagacaaatcccacatgggacactgatgtacgtgaagatgttctagacgaatgtgcc
aagcacggtggtgtgctacatatacatgtggacacggtttcgcccacaggcaccgtatat
gtcaagtgtccgagcacaaccacagcggtactggccgtaaatgcgctgcacggacgctgg
tttgcggggcgtgtaattaccgcggcgtacgtaccggtaattaactatcactccatgttc
ccggatgctatcagcgcagtcgacttgattgcatcgacccgcaagaatgctgacgattga
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