Drosophila virilis: 6634253
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Entry
6634253 CDS
T01066
Symbol
l(2)37Cb
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6634253 (l(2)37Cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6634253 (l(2)37Cb)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6634253 (l(2)37Cb)
Spliceosome [BR:
dvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
6634253 (l(2)37Cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
nSTAND_NTPase5
SRP54
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6634253
NCBI-ProteinID:
XP_002057639
UniProt:
B4M936
LinkDB
All DBs
Position
4:26007685..26010897
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AA seq
894 aa
AA seq
DB search
MSSKSRKRTASSSSSSAEEPDSEEESRLKDLRERDEFANRLKQRDEERTRKVVEATGGRK
AIEEATKRLKLEHEDRDKIVPHLRVQSRRQYLEKRKEDKVAELEADILDDEYLFEESVLT
KREREERQYKKQLLNIAKEHEKARELERIQRYHMPQDLKKGERSEYVEVDEFEKQPNSEQ
KKWEAEQLASARFQFGAKDAKAEEEYELLLDDQIDFIQALTLDGTREKTAKQAELTEKER
KRLTLDETRKSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKM
IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS
EPDLGSYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDA
PIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEV
LQDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNII
YVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHEL
EENTVPEICRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGE
LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTA
RKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEI
DMVSCLPETINVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLY
HELVFTSKEYMRQVIEIESKWLLEVAPHYYKSKELEDSTNKKMPKTAGRAEMTQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaaagtcgtaaacggacggccagcagcagcagtagcagcgcggaggagcca
gacagcgaagaggagtcgcgtcttaaggatctaagagagcgagatgagtttgccaatcgc
ttgaagcagcgtgatgaggaacgcacccgtaaagtggttgaggcaactggcggacgcaaa
gcgattgaagaggccaccaagcgcctgaaactggagcatgaagatcgggacaagattgtg
cctcatctgcgcgttcaatcgcgccgacagtacttggaaaagcgcaaggaagacaaagtg
gctgagctggaggcagatatactggacgacgaatatctcttcgaagagagcgttttaacc
aagcgcgaacgggaggagcgccagtacaagaaacaactgttgaacatagccaaggagcat
gagaaggcgcgtgagctggagcgcattcagcgttatcacatgccgcaggatcttaagaag
ggcgagcgatcggagtacgtggaggtggatgaatttgagaagcagcccaactcggagcaa
aagaaatgggaggctgagcagctggcctcagcacggttccagtttggtgccaaggacgcg
aaggctgaggaggagtacgagttgctgctggatgatcaaattgatttcatacaggccctc
acgcttgacgggacccgagagaagaccgccaagcaagctgaactaaccgaaaaagaacgc
aagcgtctgacgctggatgagacgcgcaaatcgttgcctgtttatccctttaaggaggat
ctcattgcagctgtaaaggagcaccaggtgcttatcattgaaggagagactggctctggc
aagaccacacaggtgccacagtaccttgttgaagctggttttacaaaggataaaaaaatg
attggctgcacacagccgcgccgcgtggctgccatgtcagtggctgctcgagtggccgaa
gaaatgggtgttaagctgggcaatgaggtgggctacagcattcgcttcgaggactgcaca
tcggatcgcaccatactcaagtacatgacagatggcacgttgcaccgtgagttcctctcg
gaaccggatctgggctcatacagcgtcatgatcattgatgaggcccatgagcgtacgctg
catacggatattctgtttggccttgtgaaggatatagcacgatttcggcccgagctaaag
ctgctcatttccagcgctacgcttgacgcagagaaattctccgcattctttgacgatgcg
cccatttttcgtatacccggtaggcgctatccggttgacatattctatacgaaagcgccc
gaggcggactatattgacgcttgctgcgtatcggtgctgcagatacacgctacgcagccg
cttggcgatattttggtatttcttacgggccaggacgagatcgagacgtgtcaggaggtg
ctgcaggatcgtgtcaagcgtttgggctccaaaatacgcgaactcattgtcattccagtc
tatgccaatttacccagcgacatgcaggccaaaatctttgaaccgacaccgcctaacgca
cgcaaggtgatccttgccacgaacattgcggaaacgtcgctgaccatagacaacatcatt
tatgtcatcgatccgggctttgccaagcaaaacaactttaactctcgcacgggcatggaa
tccctcatggtggtgcccatttcaaaggcttcggcaaatcaacgagctggacgcgctgga
cgtacagcaccaggtaaatgcttccgtctgtacaccgcctgggcgtacaagcacgagctg
gaggagaacacagtgcccgaaatctgccgcattaaccttggcaatgcggtgctcatgctc
aaggctttgggcattaacgatctaatacactttgactttctcgatccgccaccacacgag
acgctagtgctggcgctggagcagctttacgcgttgggcgcgctcaatcatcacggcgaa
ttgaccaagctgggccgtcgcatggcggagtttcccgtggatccaatgatgggaaagatg
ctgctggccagcgaaaaatacaagtgctccgaggaaatggtcaccatagcggccatgctg
tcagttaatagcgccatattctatcgccccaaggacaagatcatacacgctgataccgcg
cgcaagaacttcaatcatatgcacggtgaccatctaagtctgcttcaggtctacaaccag
tgggcggagacggattacagcacccagtggtgctacgagaactttatacagtacagatcc
atgaagcgggcccgcgatgtgcgcgagcaactggtcggtctgatgcagcgcgtcgaaata
gacatggtcagctgtctgccagaaacgatcaacgtgcgcaaggcagccacggctggctac
ttttatcatgtggcacgtttgtccaagggcggtcactacaagacaattaagcacaatcaa
actgtaatgatacatcccaactcgtcgttgtttgaggagctgccgcggtgggtgctatat
catgagctggtcttcacctccaaagagtacatgcgtcaggttattgaaattgaaagcaag
tggctgcttgaggtagctcctcattactacaaatcaaaggaactggaggattcaacgaat
aaaaagatgcccaaaaccgcaggacgcgcagagatgacgcaataa
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