Drosophila virilis: 6634742
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Entry
6634742 CDS
T01066
Symbol
Polr2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03020
RNA polymerase
dvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6634742 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
6634742 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6634742 (Polr2A)
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6634742 (Polr2A)
Enzymes [BR:
dvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6634742 (Polr2A)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6634742 (Polr2A)
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6634742 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
6634742
NCBI-ProteinID:
XP_002058190
UniProt:
B4MAN9
LinkDB
All DBs
Position
X:complement(1964610..1972121)
Genome browser
AA seq
1889 aa
AA seq
DB search
MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETLEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLVKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNP
KIKEIVVKSKGQPRKRLAYVYDLCKGKTICEGGEDMDLTKDNQQVDPNKKPGHGGCGHYQ
PSIRRTGLDLTAEWKHVNEDSQEKKIIVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLADIIKANNELRKNEASGAAAHVIQENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRAHET
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQMAIKKAKDDVINVIQKAHNMELEPT
PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQHMPT
VKLSNKVFEKRFKFDWSNERYMRRVFTDDVIKEMTDSSDAIQELESEWDRLVSDRDNLRT
IFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIRGVKGLLERCVIVTGNDR
ISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK
FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNSLGSSMLGGAAIFMGGGSTP
SMTPPMTPWVNCHTPRYFSPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSS
PGPSMSPHFSTSPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYA
SATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNY
SSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASP
HYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLY
SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP
MYSPTAPSHYSPTSPAYSPSSPTFEESDD
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacaacggactcgaaggcgccgctgcgccaggtgaagcgtgtacagtttggc
attttgtcacctgacgaaatccgccggatgtctgtgacggagggcggcgtacaatttgcg
gagacgctggagggcggtcgtccgaagctgggcggcttgatggatccgagacaaggcgtc
atagatcgcacatcgcgctgtcagacatgcgccggcaacatgaccgagtgtcccggacat
tttgggcacattgatctggtcaagccggtgtttcacattggcttcatcacgaagacgatc
aagatattgcgttgcgtgtgcttctattgctccaagatgctggtgtcgccgcacaatccc
aagatcaaggagatcgttgtcaagtccaagggccagcctcgcaagcgtctggcctacgtc
tacgatctgtgcaagggcaaaacgatctgcgagggcggcgaggacatggatctgaccaag
gacaatcagcaggtcgatcccaacaagaaacccggccacggcggctgcggccattaccag
ccctcgatacgtcgtaccggcctcgatctgaccgccgagtggaaacacgtgaacgaggat
tcgcaggagaaaaagatcatcgtgtccgcggagcgcgtctgggagatacttaagcacatc
accgatgaagagtgtttcatactgggcatggatcccaaatatgcccgacccgattggatg
attgtcacagtgctgcccgtgccgccgctggccgtgcgtccggccgtcgtcatgtttggc
gcggcaaagaatcaggacgatttgacccacaagctggcggacattattaaggcgaacaac
gagctgcgcaagaacgaggccagcggcgccgccgcgcacgttatccaggagaacatcaag
atgctgcagttccacgtggccacactcgtcgacaatgatatgcccggcatgccgcgtgcc
atgcagaaatccggcaagccgctgaaggcaatcaaggcgcgtcttaagggcaaggaggga
cgtattcgaggtaatcttatgggcaaacgtgtggacttttcggcccgtacggtcatcaca
cccgatcccaatttgcgtatcgatcaggtgggcgtgccgcgctccatagcacagaacctc
acctttccggagctggtaacgcccttcaatattgatcgcatgcaggagctggtgcgacgt
ggcaactcccagtatccgggcgccaaatacattgttcgcgacaatggcgagcgcattgat
ctgcgttttcatcccaaatcatcggatctgcatctgcagtgcggctacaaagtggagcgg
catttgcgcgacgacgatctggtgatcttcaatcgacagccgacgctccacaagatgagt
atgatggggcacagggtgaaagtgctgccctggtccacgttccgcatgaatctgtcctgc
acatcgccatacaatgccgatttcgatggcgacgagatgaatctccatgtgccacagtcc
atggagacacgcgccgaggtggagaacatacacatcacaccgcgtcagatcataacgccg
caggccaataagcccgtcatgggcattgtccaggacaccctgacggccgttcgtaagatg
accaagcgtgatgtgttcataacgcgcgaacaggttatgaatctgctcatgtttctgccc
acctgggatggcaaaatgccgcagccgtgcatcctgaagccgcgcccgctttggacgggc
aaacagatattctcgctgattatacccggcaacgtgaacatgatacgcgctcatgaaacg
catcccgatgaggaggatgacgggccctacaagtggatatcgcccggtgacaccaaggtt
atggtggagcacggtgaactgatcatgggcatactctgtaagaagacgctgggcacatct
gccggctctctgctgcatatttgtttcctggagctgggccacgacatcgctggccggttt
tacggcaacatccagacggtcattaacaactggctgctgctcgagggccacagcattggc
attggcgacactattgccgatccgcagacatacaacgaaatccagatggccatcaagaag
gccaaggacgatgtcatcaatgttatccagaaggcgcacaacatggaactcgaaccgacg
ccgggcaacacgctgcgtcagactttcgagaacaaggtgaatcgcatcctaaacgatgct
cgtgacaaaactggcggctccgccaagaaatccctcaccgaatacaacaatctaaaggct
atggtcgtgtccggctcgaagggctccaacattaacatctcacaggttattgcttgtgtg
ggccagcagaacgtggagggcaagcgtataccgtacggcttccggaagcgcactctgccg
catttcatcaaggacgattatggtcccgagtccaggggctttgtggaaaactcctatctg
gctggcctgacgccctccgagttctatttccatgccatgggcggtcgcgagggtctcatc
gatacggccgtcaagacagccgaaaccggctacattcagcgtcgtttgatcaaggctatg
gagtccgtgatggtcaactacgatggcaccgtgcgcaactctgtcggtcagctgattcag
ttgcgttacggcgaggacggcctctgcggcgagctggtcgagttccagcacatgcccacg
gtcaagctgtcgaacaaggtgttcgagaaacgtttcaaattcgattggtccaacgagcgc
tatatgcggcgcgtctttacggacgatgtgattaaggagatgacagacagcagcgatgcc
atacaagagctggagtccgagtgggatcgactggtcagcgatcgcgacaatttgcgcaca
atctttcccaatggcgactcaaaggtggtgctgccctgtaatttgcagcgcatgatctgg
aacgtccagaagatctttcacatcaacaaacgcctgcccacagatctatcgcccatgcgt
gtcatacgcggcgtcaagggtctgctcgagcgctgcgtgatcgtcaccggcaacgaccgc
atctcaaagcaggccaatgagaatgcaactctgctgttccagtgcctcatacgctccacg
ctgtgtaccaaatatgtttcggaggaatttcggttgtcgacggaggcgttcgagtggttg
atcggtgagatcgagacgcgtttccagcaggcacaggccaatcctggtgaaatggttggc
gcactggccgcccagagtttgggcgaaccggccacccagatgacactgaacactttccat
tttgccggtgtctcgtccaaaaacgtaacactgggcgtgcccaggctcaaggagatcatc
aatatatcgaagaagccaaaggcgccttcgctaaccgttttcctgacgggcggcgcggca
cgcgatgcggagaaggccaagaacgtgctgtgccgtctggagcatacgacgctacgcaag
gtgacggccaatacagccatctactatgatccggatccgcagcgtacggtcattgccgaa
gatcaggaatttgttaatgtctactatgaaatgcccgactttgatccgacgcgcatttca
ccctggctgctgcgcatcgagctcgatcgcaagcgcatgacggacaaaaagctgaccatg
gaacagatcgccgagaagataaatgtcggctttggcgaggatctcaattgcatcttcaat
gatgacaatgcggacaaattggtgctgcgcatacgcatcatgaacaacgaggagaacaag
ttccaggacgaggacgaagccgtcgacaaaatggaggatgacatgttcctgcgctgcatc
gaggcgaacatgttgtcggacatgacactgcagggcatcgaggccattggcaaggtgtac
atgcatctgccccaaacggacagcaagaagcgcattgtcatcacggagacgggcgaattc
aaggccattggcgagtggttgctcgaaacggacggcacctccatgatgaaggtgctctcc
gagcgcgatgtcgaccccatacgcacctcgtccaatgacatttgcgagattttccaggtg
ctcggcatcgaagctgtgcgtaaatccgttgaaaaggaaatgaatgccgtgctgcagttc
tatggcctctacgtgaactatcgccatctggcgctgctgtgcgacgtgatgacggccaag
ggccatttgatggccattacgcgtcacggcatcaatcgacaggatacgggcgcccttatg
cgctgctcttttgaggagacggtcgatgtgctgatggatgccgccgcccatgcggaaacg
gatcccatgcgcggcgtctccgagaacattatcatgggacagctgcccaaaatgggcacc
ggctgctttgatctgctgctggacgccgagaaatgccgtttcggcatcgagatacccaac
tccttgggcagcagcatgctgggcggcgctgccatctttatgggcggcggctccacgccc
agcatgacgccgccgatgacgccttgggtgaactgccatacgccgcgctacttctcaccc
tccggtcatgtgagcggcatgacaccaggcggacccagtttctcgccgtcggccgcatcg
gatgcatcgggcatgtctcccagctggtcgccagcgcatcctggatcctcgcccagctca
ccgggtccctcgatgtcgccacatttttcgacctcgccaagcgtctcgccatcgtattca
cccacatcgcccaattatacggcatcttcaccgggcggtgcatcacccaattattcaccg
tcgagcccgaactattcgccgacatcgccgctttatacggccaccagtctacggtatgcg
tcagcgacgcccaatttcaatccgcagtcgactggctattcgccgtcgtcgtcgggctat
tcgcccacatcgcctgtgtattcgcccacgtcgaatttccagtcgagtccatcgtttgct
ggcagcggcagcaatatgtattcgccgggcaatgcgtattcaccgagctcctcaaactat
tcgtctaattcgccgtcttactcaccgatgtcgccgtcatattcgccgtcgagtccatcg
tactcgccaacgtcgccctgctattcacccacctcgccttcgtactcaccgacttcgccg
aattatacgcccgctacgccttcgtattcaccgacgtcgcccaactattcggcctcgccg
cattattcgccagcatcgccggcatactcacagacgggcgtcaaatattcaccaacatcg
ccgacatattcgccgccgtcgccgtcgtatgatggttcgccgggctcgccacaatatacg
cctggttcgccgcagtactcgccgacctcacccaaatattcaccaacatcgccgctgtac
tcgcccagttcgccgcagcactcgccctcgaaccagtacagtccgacaggatcaacatat
tcggcgacgagtccacgctactcgcccaacatgtctatttactcgccgagcagcaccaaa
tattcacccacatcgccaacgtacacgcccacagcgcgcaactattcgcccacatcgccc
atgtactcaccgacggcgccctcgcactacagccccacgagtcccgcctactcgcccagc
agccccacatttgaggagagcgacgactaa
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integrated database retrieval system
