Drosophila virilis: 6635676
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Entry
6635676 CDS
T01066
Symbol
tho2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
dvi
Drosophila virilis
Pathway
dvi03013
Nucleocytoplasmic transport
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6635676 (tho2)
09122 Translation
03013 Nucleocytoplasmic transport
6635676 (tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6635676 (tho2)
03041 Spliceosome [BR:
dvi03041
]
6635676 (tho2)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
6635676 (tho2)
Spliceosome [BR:
dvi03041
]
Complex C
Other components
EJC/TREX
6635676 (tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6635676 (tho2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Cupin_NOL9
TPR_24
Motif
Other DBs
NCBI-GeneID:
6635676
NCBI-ProteinID:
XP_002059247
UniProt:
B4MDP4
LinkDB
All DBs
Position
4
Genome browser
AA seq
1680 aa
AA seq
DB search
MRRLKKLAKSHSVTGTQENDAAATATATTAAAASDPAAPTDANGGGDTLLNVDIFKHFDK
SGRSEFIKYLKQQLQDSPESPVFDQHGTFKHGISNAIYELLWQALRYKLKKDVVLHVLTD
VVALHKEFPSLILDVVNILDSETSLMTEGLQEERHGFVQIVKDLDKVLPESLLKERLEID
TLQEVGIVKNKSFYTKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQDFEEHTTPDA
IMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWKLFIPLLRSYMPTGAIICEVLGYKFC
HFRATRTPRSLYHVCALLLKHGVIELNDVYVWLTPNDGSIRANWEEELAEAREMVRKLHV
ISTNKKEEDKEPPAPPSTKKFDEEKYNANQKFGLCEALLKVGDWENALKIIQKLPDQSVV
VQEPIARGIVELVHLSVEQIYYKKCFKAPAGRKPSRNRLYEDAALVAKLQAQEFADLRKY
TWPMANVLGPAMHCDTVLMYKLVRIMGKILLDMGVDNLNGPPPNTELEQHYYDIISCLDA
SILPSLLYLDSNCSMSEEIWAVLKFFPYHLRYSMYARWKNDSYQLHPNLIRRCGLAQRDI
KALMKRVSKENVKPLGRLVGKYSHCTPGLLFDYILVQIQIYDNLIGPVCDMLKYLTALSF
DCLGYCIIESLTMTGRGRFKDDGTSLSLWLQSLASFCGTIYKKYSIEMSGLLQYVANQLK
SQKSLDLLVLRELVHKMAGVESCEEMTNDQLQALCGGEQLRGEAGYFSQVRNTKKSSNRL
KEALANNDLAVTLCLLMAQQKHCVIFRETAAHSHLKLVGSLYDQCQDALVQFGTFLGSTY
SVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKADPNAKKLTTAQK
LQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFWSLSMYDLHVPNEIYQREIGK
LKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKILQRLQEQKDGWFL
LRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVQTIHNLKTANFSTLLCYDRLFC
DITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQFSE
ANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLSKLAQI
IERKVDKVREEEKTKRPDLFAIASSYIGQLKLKSPHMFKESDFHQVAERPVKEPVPAPPG
TGTVKLLTGDKVNATTASVTSTPTTKAAPGAPFYEQKAGVKETDAKAVQPMRGEAKLVKP
EGSSTVSVVSISKSVSAPSNSERESKRDVATAVLREPQSHRSMDAREELQSSANNNNSNN
NPSSNNNNPSSNNNNNPSSSSNGNQSERRSRERDREREERHSMSSTRSSQRDSNRNSNSN
KERTEAELQQRARERSQRLEELEAAAALRAQKREKLSRRSDERSQHRHDGVETVDLVTGS
GGSSSQDHRHYDDYEGRQRDRDLSSVSNESNGSLQHRRSHETIEYDKDSKRRKLESSSSS
SKKVEELVDSVKKARGLKTKERNKDKMSDEERDARKDRKLGRKRDRNEESGTSDHKRRRE
AQNGDDDMRERDRHRDKSSRERSHDKFDRERGGGGGGGSSRGDDRQYSISKSTRSSRMNY
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtttgaagaaacttgcgaagagtcacagcgtgacaggtacgcaagaaaacgat
gcagcggcgacggcaacagcaacaacagcggcagctgcgtccgatccggcggccccgaca
gatgccaacggcgggggcgatacgctacttaatgtggacatctttaaacatttcgacaaa
tccggccgcagcgaattcattaaatacctgaagcaacagctgcaggatagtccggagagt
ccggtgttcgaccagcatggcacattcaagcacggcatctcgaatgccatttacgagctg
ctctggcaggcattgcgctacaagctcaagaaggatgtcgtgctgcacgtgctcacagat
gttgtggcgctgcacaaggagtttcccagtctgatactggatgtggtaaacatactggac
agcgaaacgtccttgatgaccgaaggtctgcaggaggagcgccatggttttgtgcaaatt
gtcaaggatctggacaaggtgctgccggagagcttgctcaaggagcgcctggaaattgat
accttacaggaagtgggtattgttaagaacaaaagtttctatacgaagttcatcaaagtc
aagactaagctctactataagcagcgccgcttcaacctgtttcgcgaggagagcgagggt
tttgccaagctcatcacagaactgaatcaggactttgaggagcacacaacccctgatgcc
ataatggacataattaaatccctgataggctgttttaatctggatcctaatcgcgtgctg
gatattatcattgaatcgtttgagacgcgtcccgatcgctggaagctttttatacccttg
ctgcgcagctatatgcccaccggcgccatcatttgcgaagtgctcggctataaattctgc
cactttagggcaacgcgcacaccgcgctccctgtaccatgtgtgcgccttgctgctgaag
cacggcgtcatcgagctgaatgatgtttatgtctggctaacgccgaatgatggcagcata
cgtgccaactgggaggaggagctggccgaggcgcgagaaatggtgcgtaagctccatgtg
atttccaccaacaagaaagaagaggacaaagaaccaccagcaccaccatctaccaagaaa
ttcgatgaggagaaatacaatgccaatcaaaagtttggtctgtgcgaggctctgctcaag
gttggcgactgggagaacgcgctcaaaattatacaaaagctgccggatcagtcggttgtc
gtgcaggagcccattgcacgcggcattgtggagctggtgcatctgtcggtcgagcagatc
tactacaagaaatgcttcaaggcacccgctggccgcaagcccagccgcaatcggctgtac
gaggatgccgcgctggttgccaagctgcaggcgcaggagtttgccgatttgcgcaaatac
acatggcccatggccaatgtgctgggtccggcgatgcactgcgataccgttttgatgtac
aaactggtccgcattatgggcaaaatattactggacatgggcgtggacaatctaaacgga
ccgccgccaaatacggagctggaacagcattattacgatatcatcagctgcctggacgcg
agcatattgccctcgctgctttatctggacagcaattgttccatgtccgaggagatctgg
gctgtgctcaaattctttccatatcacttgcgctacagcatgtacgcacgctggaagaac
gacagctatcagctgcatccgaatctgatacgacgttgcggcctggcgcagcgggatatc
aaggcgctgatgaagcgcgtcagcaaggagaatgtcaagccactggggcgtctggttggc
aaatatagccactgtacgcccggcctgctctttgattatatcctggttcagattcaaatt
tatgacaacttaatcggacccgtctgcgacatgctcaagtacttgactgccttgtccttt
gactgtctgggctattgcatcattgagtcgctgacgatgacgggtcgcggacgcttcaaa
gatgacggcacctcgctctcgctgtggctgcagagccttgcctccttctgtggcaccatc
tacaaaaagtacagcatcgagatgagcggcctgctgcagtatgtggccaatcagctcaag
tcacagaagagtctcgatttgctggtgctgcgcgagctcgtccacaaaatggccggcgtc
gagtcctgcgaggagatgacaaacgatcagctacaggcactttgcggcggcgaacagctg
cgcggcgaggctggctactttagtcaggtgcggaacactaagaagtcatcgaatcgtttg
aaggaggcattggccaacaacgatctcgccgtcacactctgcctgctgatggcccagcag
aagcactgcgtcatctttcgtgaaacggctgcgcacagccatctgaagctggtgggcagt
ctgtacgatcagtgccaggatgccttggtgcagtttggcacatttctgggctccacctat
tcggtggatgagtatgtggaacgcctgccatcgattatcacaatgctgcgcgaatatcac
attaatacagatgtcgccttctttctggcacggcccatgttcacgcatcagattaaccaa
aaatacgatcaactgcgcaaggcggatcccaatgccaagaagctgacgacggcgcaaaag
ctacaaaaatatctggaagccacgcagttgataatgaatccaattgtggagtcggtgcga
ccgctgcacagctccaaggtgtgggaggacataagcccacagtttctggtcactttctgg
agcctgagcatgtacgatctgcatgtgcccaacgagatctatcagcgggagattggcaag
ctaaagcaactggcacagcaagctgccgagggcaaggattccaaccaatccaaaaacaaa
aaggaacaggaacgttacattgcgctcatggagaagctaaacgatgagcgcaaaaagcag
cacgagcatgtggacaagatactgcaacgcctgcaggagcagaaggatggctggttcctg
ttgcgctcggccaagtcggcgaaaaacgataccattacacagttcctgcaattgtgcctc
ttcccgcgctgcaccttcacggcgctcgatgcgctctactgtgccaagttcgtgcagacc
atacacaatctaaagacagccaatttctccacactgctctgctacgatcggctgttctgc
gacattacgtactcggtgacatcgtgcacggagggcgaggcgacgcgttatggtcgcttt
ttgtgtgccatgctggagacggtgatgcgttggcatgcggatcaggcggtcttcaacaag
gaatgcgccaattatcccggctttgtgaccaaattccgtgttagcaatcagttctcggag
gcaaacgatcacgtgggctacgagaattaccgacacgtgtgccacaaatggcattataag
atcaccaaggcgattgtgttctgtttggactccaaggactttatgcagatacgcaatgcg
cttatcatactgatgcgcatactgccccattatccggtgctttcgaagctagcgcagatc
atcgaacgcaaggtggacaaggtgcgcgaggaggagaaaaccaagcgacccgatctgttt
gccatcgcctccagctatattggccagctgaagctgaagtcgccgcacatgttcaaggag
agcgacttccatcaggtggccgagcggcccgttaaggaaccggtgcctgcgccgcccggc
accggcacggtcaagctgctgaccggcgacaaggtgaatgccacgactgcctcagtgacg
tccacgcccacaacgaaagcagctcccggtgcgccgttctacgagcaaaaggcgggcgtc
aaggagacagacgccaaggctgttcaaccgatgcgcggcgaggccaagctcgtcaaaccg
gagggcagcagcacggtgtctgtggtgtccatctcgaagtccgtttcggcgccgtccaac
agtgaacgcgagagcaaacgagatgtggcaacggcagtgttgcgggagccccaatctcat
cgcagcatggatgccagggaggagctacagtccagtgccaataacaacaacagcaacaac
aacccgagcagcaacaacaacaacccgagcagcaataacaacaacaatccgagcagcagc
agcaatggcaaccaaagcgaacgtcgcagccgtgaacgggatcgggagcgcgaggaacgg
cacagcatgagcagcacgcgcagctcgcaacgggacagcaatcggaacagcaacagcaac
aaggaacgcaccgaggccgagctgcagcagcgcgcacgcgaacgttcccagcgtctcgag
gagctggaggcggcggccgcgctgcgtgcccagaaacgtgagaagctatcgcgacgcagc
gacgagcgcagccagcatcggcacgatggcgtcgagactgtcgatctggtcaccggcagc
ggcggcagcagcagccaggatcatcgacactacgatgactacgaaggacgccagcgagat
cgcgacctcagttccgtctccaacgagagcaacggttcgctgcagcatcgacgcagtcac
gagacaattgaatatgataaagattctaaacgtcgtaaattggaatcgtcgtcgagcagt
tcaaagaaggtggaggagctcgtcgacagcgtaaagaaggcgcgcggcctcaaaaccaaa
gagcgcaacaaagacaagatgtccgatgaggagcgtgacgcgcgcaaggatcgcaagctg
ggtcgaaaacgggatcgcaacgaggagtccggcaccagtgatcacaagcggcggcgtgaa
gcacaaaacggcgatgatgacatgcgcgaacgggatcgccatagagacaaatcatcccga
gaacgttcgcacgacaagtttgatagggaacgcggcggcggtggaggtggaggcagttcg
cgtggtgatgatcgacaatacagcatctcgaagtcgacacgctcatcgagaatgaactac
tga
DBGET
integrated database retrieval system
