Drosophila virilis: 6636103
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Entry
6636103 CDS
T01066
Symbol
Prp16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6636103 (Prp16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6636103 (Prp16)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6636103 (Prp16)
Spliceosome [BR:
dvi03041
]
Complex C
Other components
Step II factors
6636103 (Prp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Microtub_bd
T2SSE
Flavi_DEAD
AAA_16
AAA_25
ABC_tran
cobW
PhoH
ATPase
AAA_7
SRP54
Sigma54_activat
DUF3663
AAA_23
Motif
Other DBs
NCBI-GeneID:
6636103
NCBI-ProteinID:
XP_002059645
UniProt:
B4MEU2
LinkDB
All DBs
Position
X:14443992..14468934
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AA seq
1231 aa
AA seq
DB search
MSEDDAGVHRLEGTMVQEQRGGLVLKRPKDSNSASGSGGSFKVPQGSLLGLDKLAAKRRA
EKARAERLISFQDNEYDDGGTPSSTPNATTPASEFAFKKPDTKSFEKLSRQLREHKDETP
SHTGGVSEKARERLREHIQRDRDRHKGAVHKTTRDDSDGKRDRERDRDRDRERERDRQRR
GDERRKRAREQDQEQSHRDGRRRDRERDRDRSVSVRSVHTPREPGTPGGTGGVLNSAWDD
DDAEGGGVRKSDWDFPTPRGAGSGYGTGDWSDRGNSRSRSYNADDTARATPAHRYNQWAH
DRKRSGATPWTGDAESRDLWEEEQRRLDREWYNIDEGYDDENNPFGGTNADYYRRREEQL
EQKRKKRISAQQRQNNRDNELWERNRMLTSGVVTSINVSDDFDEEALERVHLLVHHIVPP
FLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELGGTKL
GNIMGVQRPQDEDDAKFDKEHDTADYRKDQKFADHMRDMQDTKSGGKSEFSRKKTIGEQR
RFLPVFASRQELLNVIRENSVVIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVA
AMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPDLDSYAAI
IMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTF
PVDVMFSKNACEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLSEIDN
APELSILPIYSQLPSDLQAKIFQKSADGVRKCVVATNIAETSLTVDGIIYVIDSGYCKLK
VYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAFRLYTQRQYKDELLALTVPEIQRT
NLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEF
PLDPPQCQMLIVACQMECSAEVLIIVSMLSVPSIFYRPKGREEEADGVREKFQVPESDHL
TYLNVYLQWKQNSYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQKMNVKSCGTDWDIV
RKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEY
MQCATAVDGYWLAELGPMFFSVKETGRSGRDKKKLAAEHLKEMEEQMLQAQHEMEERKQQ
AAQREEQLAGKQEIATPGNATPRRTPARIGL
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggatgatgcaggcgtgcatcgcttggagggcaccatggtccaggagcagcgc
ggcggcctggtgctcaagaggcccaaggacagcaacagtgccagcggaagcggcggcagc
tttaaagttccgcagggctcgctactgggcctggacaagctagctgcaaagcgacgcgct
gaaaaggcgcgtgccgagcgcctgatctcctttcaggacaatgagtacgatgacggtggc
acgccatcaagcacacctaacgccacaacgcctgccagcgaatttgcctttaagaaaccg
gacactaagagcttcgagaagctgagtcgacagctgcgcgagcacaaagacgagacgcca
tcgcacacgggcggcgtctcggagaaggccagagaacggctgcgcgagcacatccaacgt
gatcgggaccggcacaaaggtgcagtccacaagacgacgcgcgatgactcagacggtaaa
cgggatcgcgagagggatagagacagggatagagagcgtgagcgggacagacagcgtcgc
ggcgacgagcgacgcaagcgagcacgggaacaggatcaggaacagtcccacagagacggc
agacgcagggatcgagaacgtgatcgggatcgttctgtgtcggtgcgtagcgtgcacacg
cccagggagccgggcacaccaggcggcactggcggtgtattaaatagcgcctgggatgat
gacgatgccgagggcggcggtgttcgcaaatctgattgggacttcccaacgccacgtggc
gctggctccggctacggcaccggcgattggtccgatagaggcaacagtcgcagccggagc
tataatgcggatgacacagcgcgcgcaacgccagcgcatcgctataatcaatgggcacac
gatcgcaagcgcagcggtgccacgccctggaccggagatgccgagtcccgtgacctgtgg
gaggaggagcagcgccgactcgatcgcgaatggtacaacattgacgagggctacgatgac
gagaacaatccgtttggcggcaccaatgccgattactatcgccggcgcgaggaacagctg
gagcagaagcgcaaaaaacgcatcagcgcccagcagcgacagaataaccgggacaatgag
ctgtgggagcgcaatcggatgctcacatcgggcgttgtcacctcgatcaatgtcagcgac
gattttgatgaggaggcgctcgagcgtgtccatttgctggtacatcatatagtgccacca
tttttggacggacgcattgtgttcaccaagcagccggagccggtggtgccagtcaaagat
cccacctccgatatggcattgctggcgcgcaaaggcagcgccctggtgcgcaattatcgg
gagcaaaaggagcgccgcaaggcgcaaaagaaacactgggagctgggcggcaccaagctg
ggcaacataatgggcgtgcagcggccgcaggacgaggatgatgccaaattcgataaggaa
cacgacacagccgactatcgcaaggatcaaaagtttgcggatcacatgcgcgacatgcag
gacaccaaaagcggcggcaaaagcgaattctcacgcaagaaaaccatcggcgaacagcgt
cgcttcctgccagtcttcgcctcgcgccaggagctactcaatgtcatacgcgagaactcg
gtggtcatcattgtcggcgaaaccggcagcggcaagacaacgcagctaacccaatatttg
cacgaggatggctacagcaagcgcggcatgattggctgcacccagccgcgacgtgtggcc
gccatgtctgtggcgaagcgcgtctccgatgagatggacacacaattgggcgaggatgtc
ggctatgccatacgcttcgaggactgcacttcggagcgcaccgtcatcaagtacatgacc
gatggtattttattgcgtgagagcttgcgcgatccggatctggacagctatgcggccatt
attatggatgaggcgcacgagcgatcgctctcaacggatgtgctcttcggattgctgcgt
gagattgtggcgcgacgacatgacctgaagctgattgtgacctcggccacgatggactcg
agcaagtttgcgacattcttcgggaacgtgccgacgtttacaataccgggacgcacgttt
ccggtggatgtgatgtttagcaagaacgcgtgcgaggattatgtggaatcggccgttaag
caggcgcttcaggtgcatctgacgcccaacgagggcgacatgctgatctttatgcccggc
caggaggatatcgaggtcacctgcgaggtgctcgaagaacgcctcagcgagatagataat
gcgcccgagctgagcatattgcccatctattcgcagctgccctccgatctgcaggcgaag
atctttcaaaagtccgccgacggtgtacgcaaatgtgtggtggccaccaacattgcggaa
acatcgctcacagtcgatggcatcatctatgtgatcgactccggctactgcaagctgaag
gtctacaatccgcgcatcggcatggatgccctacagatctatccgatctcgcaggcgaat
gccaatcagcgttccggtcgtgccggtcgcacgggtcccggccaggcgttccgcctctat
acacagcgccaatacaaggacgagctgctggcactcaccgtgcccgaaatacagcgcacc
aatctggccaatacggtgctgttgctcaaatctctgggcgttgtcgatctgctgcaattc
catttcatggacccaccgccacaggacaacatcctcaattcgctctaccagctgtggata
ttgggcgcattggatcacaccggcgccctaaccactctgggcaggcaaatggccgagttt
ccgctggatccgccgcagtgccagatgctcatcgttgcctgccaaatggagtgcagtgcc
gaggtgctcatcatagtatccatgttgtcggtgccctccatattctataggcccaagggg
cgcgaggaggaggcggatggtgtacgcgaaaagtttcaggtgcccgaatcggatcatcta
acctatttgaatgtttacctgcagtggaagcagaacagctatagctccacgtggtgcaac
gagcacttcatacacatcaaggcgatgcgcaaggtgcgcgaggtgcgccagcagctaaag
gacatcatgacgcagcagaaaatgaacgtgaagtcatgcggcaccgactgggacattgtg
cgcaagtgcatctgctccgcctatttctatcaggcggcacgtctgaagggcatcggcgag
tacgtgaatctgcgcacaggcatgccctgccatttgcatccgacatcggcgctatacggt
ctgggcaccacgcccgactatgtggtctaccatgagctaattatgaccgccaaggagtat
atgcagtgtgccaccgctgtcgatggctactggctggccgagctggggcccatgttcttt
tcggttaaggagaccggacgcagcggccgggacaaaaagaagttggccgccgagcatcta
aaggaaatggaggagcaaatgttgcaggcccagcacgagatggaggagcgcaaacagcag
gcagcacagcgcgaggagcagctggcgggcaaacaggaaatcgccacgcccggcaatgca
acgccacgccgtactccggcacgcatcggcctctag
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