Nitratidesulfovibrio vulgaris DP4: Dvul_0585
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Entry
Dvul_0585 CDS
T00452
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvul_0585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvl03019
]
Dvul_0585
Messenger RNA biogenesis [BR:
dvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dvul_0585
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
VTT_dom
Hydrolase_3
Motif
Other DBs
NCBI-ProteinID:
ABM27608
UniProt:
A1VAZ2
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Position
complement(740245..741804)
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AA seq
519 aa
AA seq
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MGLMIFAYIAIGAVLGAGTGYLLHRYVSAKRIGDANELAKRIVEEARKEAQAQKKEILLQ
GQDEIFNQKRELENEFKERERELKARDRKLEEQGERLEEKLEKATQKEHEVLAIEKELTR
KERRLATLEEELEGKIAEQDHRLEEVSGLTAEEARARIMEEVEARTRHESAKMIRVIEME
ARETADRKAKEILASAIQRYAGDYVGEQTVTAVTLPSEDMKGRIIGREGRNIRALEAATG
VDLIIDDTPETVILSAYSPLRRQVAKMALERLIQDGRIHPARIEDIVRKCEQELEVQVRE
VGEQATFDAGVHGIHPDIIKLLGQLRYRTSFSQNVLQHSLEVSALCGMMAAELGMDIKKA
KRAGLLHDIGKAVDHEVEGPHALIGADIAKKYGEGKDIIHAIAAHHEDQPPKTALAVLVQ
AADSISGARPGARKELLENYVKRLEDLENIATGFEGVSKVYAIQAGREIRVMVNSENVDD
DQTYMLCKDIAAKIEKNLTYPGQIRVTVIRERRAVGYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggctcatgattttcgcatatatcgccatcggcgcggtgcttggcgcaggtacgggt
tacctgctgcacaggtatgtcagcgcaaagcgcatcggtgacgccaacgaactggcaaag
cgcatcgtcgaagaggcccgcaaggaggcccaggcccagaagaaggagatactccttcag
gggcaggacgagatattcaaccagaagcgcgagctggagaacgagttcaaggaacgcgaa
cgcgagctcaaggcccgcgaccgcaaactcgaagagcagggcgaacgccttgaggagaag
ctcgaaaaggccacccagaaggaacatgaggtgctggccatagaaaaggagctcacccgc
aaggagcgtcgtctcgccacgctcgaagaggaactcgaaggcaagatcgccgaacaggac
caccgcctcgaagaagtctccggcctcaccgccgaagaggctcgggcgcgcatcatggag
gaggtcgaggcccgtacacgccacgaatccgccaagatgatacgcgtcatcgagatggaa
gcccgcgagaccgcagaccgcaaggccaaggaaatcctcgccagcgccatccagcgctac
gcgggcgactacgtcggtgaacagaccgtcaccgccgtgaccctgcccagcgaggacatg
aagggccgcatcatcggtcgcgaagggcgcaacatccgcgcgctggaagccgccaccggg
gtcgacctcatcatcgacgacacccccgagacggtcatcctctccgcatacagccccctg
cgccgtcaggtcgccaagatggccctcgaacgcctcatccaggacggacgcatccaccct
gcccgcatcgaggacatcgtccgcaaatgtgagcaggaactcgaagtgcaggttcgcgaa
gtcggcgaacaggccaccttcgacgcgggtgtgcacggcatccaccccgatatcatcaag
ctgctcggccagttgcgctaccgcacaagcttctcgcagaacgtcctgcaacactccctc
gaagtgtcggccctgtgcggcatgatggccgccgaacttggcatggacatcaagaaggcc
aagcgcgcaggtctgctgcatgacatcggcaaggccgtcgaccatgaggtcgaaggtccg
cacgccctcatcggcgccgacatcgccaagaagtacggcgaaggcaaggacatcatccac
gccatcgccgcgcaccatgaggaccagccccccaagaccgcgctggcggttctggtccag
gccgccgactccatctccggagcgcgtcccggggcccgcaaggaactgctcgagaactac
gtgaagcgtctcgaagacctcgagaacatcgccacgggcttcgaaggcgtctccaaggtc
tacgccattcaggcgggccgcgagatacgggtcatggtcaactccgagaacgtcgacgac
gaccagacctacatgctctgcaaggacatcgccgccaagatagagaagaacctcacctac
cccggccagatacgcgtcacggtcatccgcgaacgcagggccgtggggtacgccaagtaa
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