Nitratidesulfovibrio vulgaris DP4: Dvul_0859
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Entry
Dvul_0859 CDS
T00452
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvul_0859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvl03019
]
Dvul_0859
Messenger RNA biogenesis [BR:
dvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dvul_0859
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Ortholog
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GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
ABM27880
UniProt:
A0A0H3A601
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Position
complement(1059661..1060905)
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AA seq
414 aa
AA seq
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MSDVRITIHRAASEIGGNCIEITTEDGARLILDVGRPLDVPESLEPQLPASLDLSKPVEG
VLLSHPHQDHYGLLQQLPTSWPVFSGDAAAKLIRLTSEIIHEPITRSISTWLSGSPFPAG
PFRITPLLTDHSAFDAYMIQIEVAGKKILYSGDFRTHGRKKALVERLMASPPENLDALIM
EGTNLGSDKPCISESTLEEQFVDLFQKTAGRVFVAWSAQNLDRTVSLYRACKKTGRTLVV
DLYTAEVLEMLGEHAKIPQPGWPNLKVVITSRLAEFYRRKGREDVTERMVAHGISAQRLA
ETPGRWVVMTRGSLLGDYERKGVAPNASDVWVWSMWRGYLEKTPGQGVKAWFDSFGAPSA
HLHTSGHASTADLKEFAQKMNPKVLLPVHGTAWTLGMDGFPNIAKLEDGHFVTI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtacgcataaccattcatcgtgcggcttcagagattggtggcaattgcatt
gagatcaccaccgaagatggggcacgccttatccttgatgtcggaaggcccctggacgtg
cccgaaagtttagagccacagctcccagcgagccttgatctttcgaagcccgtagagggg
gttctactatcccatccacatcaagatcactatggccttcttcaacaactgccaacctct
tggcccgtcttttctggagacgccgcagccaagctcatcaggctgacctctgaaatcatc
cacgaaccaatcacccgctcgatctcgacatggctcagcggcagcccattcccggcaggg
ccgtttcgaataacacctctgctgacagaccattccgcgttcgatgcatacatgattcag
atcgaagtagctggaaagaagattctctactcaggagactttcggacgcatggccgcaag
aaggcactggttgaacgcctgatggcgtcacctccagagaaccttgacgcgctcatcatg
gaggggacgaacctcgggagtgataagccctgcatcagcgaatccacccttgaggagcag
tttgttgacctcttccagaaaaccgctggcagggtgttcgttgcttggtccgcacaaaat
cttgaccgaacagtctcgctctatcgcgcttgcaagaagacaggccgcacgctggtggta
gatctctacacagcagaagtactcgagatgctgggggagcacgcaaaaatcccccaacct
ggatggccaaacctcaaggtggttatcaccagcagactggctgagttttatcggcggaaa
ggacgcgaggatgtgacggaacgcatggtcgcgcatggaatttctgcccaacggctcgcg
gagacgcctggacgatgggtggtcatgacccgagggtcgctgctaggcgactacgagcgc
aaaggcgtggccccgaatgcaagcgacgtgtgggtgtggtccatgtggcgcgggtatctt
gaaaaaacaccggggcaaggagttaaggcttggtttgatagcttcggtgcgccctctgcc
catttacacaccagtggtcatgcctcgactgcggatcttaaagaattcgcgcagaagatg
aaccccaaagtgctgttgcccgtacacgggacagcttggacactaggcatggacggcttc
cccaacatcgccaaactagaggatgggcactttgtcacgatttga
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