Nitratidesulfovibrio vulgaris DP4: Dvul_1196
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Entry
Dvul_1196 CDS
T00452
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dvul_1196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvl03019
]
Dvul_1196
03110 Chaperones and folding catalysts [BR:
dvl03110
]
Dvul_1196
03029 Mitochondrial biogenesis [BR:
dvl03029
]
Dvul_1196
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvl04147
]
Dvul_1196
Enzymes [BR:
dvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Dvul_1196
Messenger RNA biogenesis [BR:
dvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Dvul_1196
Chaperones and folding catalysts [BR:
dvl03110
]
Heat shock proteins
HSP60 / Chaperonin
Dvul_1196
Mitochondrial biogenesis [BR:
dvl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Dvul_1196
Exosome [BR:
dvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Dvul_1196
Exosomal proteins of other body fluids (saliva and urine)
Dvul_1196
Exosomal proteins of breast cancer cells
Dvul_1196
Exosomal proteins of colorectal cancer cells
Dvul_1196
Exosomal proteins of bladder cancer cells
Dvul_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABM28216
UniProt:
A1VCQ0
LinkDB
All DBs
Position
1467595..1469238
Genome browser
AA seq
547 aa
AA seq
DB search
MASKEILFDTKAREKLSRGVDKLANAVKVTLGPKGRNVVIEKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIYREGVKLVAAGRNPMAIKRGV
DKAVESLVRELGNLAKPTRDQKEIAQVGTISANSDSTIGNIIAEAMSKVGKEGVITVEEA
KGLETTLEVVEGMQFDRGYLSPYFVTDPEKMVCELDEPFILCNEKKISTMKDMLPVLEQV
AKMQRPLVIIAEDVDGEALATLVVNKLRGALQVVAIKAPGFGERRKAMLQDIAVLTGGQV
VSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDY
DREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALV
RVAKVLDDIKPADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDGFGFNA
ATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGM
GGMGGMY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaggaaatcctttttgataccaaggctcgtgaaaagctttcccgtggcgtc
gacaaacttgccaacgccgtaaaggtcaccctcggccccaagggtcgtaacgttgtcatc
gagaagtcgttcggttcccctgtcatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactcgaagacaagttcgagaacatgggtgcccagatggtcaaggaagtcgcttccaag
accagcgacatcgccggtgacggcaccaccaccgccaccatcctcgcccaggccatctac
cgcgaaggcgtgaagcttgtggctgccggccgcaaccccatggccatcaagcgtggcgtg
gacaaggccgtcgaatctctggtgcgtgaactcggcaaccttgccaagcccacccgcgac
cagaaggaaatcgcccaggtcggcaccatctctgccaactccgactccaccatcggcaac
atcattgccgaggccatgagcaaggtgggcaaggaaggcgtcatcaccgtcgaagaggcc
aagggccttgagactaccctcgaagtcgtcgaggggatgcagttcgaccgcggttacctc
tccccctatttcgtgaccgaccccgagaagatggtctgcgaactggacgagcccttcatt
ctctgcaacgagaagaagatctccaccatgaaggacatgctgcccgttctcgagcaggtg
gccaagatgcagcgtcctctcgtcatcatcgctgaagacgtcgacggcgaagcccttgcc
accctcgtggtgaacaagctgcgtggcgcccttcaggtcgtcgccatcaaggctcccggc
ttcggcgagcgccgcaaggccatgctgcaggatatcgctgtcctcaccggtggtcaggtc
gtctccgaagacatgggcatcaagctcgagaacatctccgtggccgatctcggcaccgcc
aagcgcgttgtcatcgacaaggagaacaccaccatcgtcgacggcgctggcaagggtgac
gacatcaaggcccgtgtgaagcagattcgcgcccagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggagcgtcttgccaagctcgtgggcggcgttgccgtcatccac
gtcggtgctgccaccgagaccgagatgaaggagaagaaggaccgcgtcgaggacgccctc
aacgcgacccgcgcagccgtcgaagaaggcatcgtccccggtggcggtaccgcgctcgtg
cgcgtcgccaaggttctcgacgacatcaagcccgctgacgacgacgagaccgctggcgtg
aacatcatccgccgcgccatcgaagaaccgctgcgccagatcgcttccaacgccggtttc
gaaggctcgatcgtggtcgaaagagtgcgtgaaggcaaggacggcttcggcttcaacgct
gccaccggcgaatacgaagacctcatcggcgtcggcgtcatcgacccgaagaaggtgacc
cgcatcgccctgcagaacgcagcttcggtcgcttcgctgctgctcaccaccgagtgcgcc
atcgccgagaagcccgaacccaagaaggatatgcccatgcccggcggcatgggtggcatg
ggcggcatgggcggcatgtactag
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