Nitratidesulfovibrio vulgaris DP4: Dvul_1715
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Entry
Dvul_1715 CDS
T00452
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03030
DNA replication
dvl03430
Mismatch repair
dvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvul_1715
03430 Mismatch repair
Dvul_1715
03440 Homologous recombination
Dvul_1715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvl03032
]
Dvul_1715
03400 DNA repair and recombination proteins [BR:
dvl03400
]
Dvul_1715
Enzymes [BR:
dvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dvul_1715
DNA replication proteins [BR:
dvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dvul_1715
DNA repair and recombination proteins [BR:
dvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dvul_1715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ABM28732
UniProt:
A0A0H3A8U9
LinkDB
All DBs
Position
2023216..2026743
Genome browser
AA seq
1175 aa
AA seq
DB search
MPLHLSRTEENMSDFVHLHCHTEYSLLDGAIRLKDLGARAKDYGMTAAAITDHGNLFGAA
YFYTTCKSFGIKPIIGCEVYVAATDRTDKTSEFARTRYHLVLLAQNNEGYHNLVRLVTRG
FTEGFHYKPRVDKELLREYSDGLIALSACLAGEVPRVLMKQGMDAGIATAQEYASIFPGR
FYLELQSNGIKEQEVLNEKLIELAGHTNLPLVATNDCHYLDATDVEAHDILLCIQTQTTV
DDPKRMRFETRELYYKSPEEMEKAFAHVPEAIANTGRIAEMCNIEMSFGKYFFPVYELPE
GMTLDTEFQRLAEEGLKKRLEKHPDRDTIDHKAYWDRLEWELKVITDMGFPGYFLIVQDF
INWAKNNGIPVGPGRGSAAGSLVAWSLRITNLDPIPYDLLFERFLNNERVSMPDIDVDFC
ERRRTEVIRYVAEKYGEDSVSQITTFGKMKAKAVVRDVGRALGMSFGETDRIAKLIPEDL
KMTIKKALEAEPDLATLYRDDPQIRKLLDVSMRLEGLSRHASTHAAGVVISDKPMSEYLP
LYKGKKGETVTQFDMKMVEKVGLVKFDFLGLRTMTLVQDALDEITRQGKTPPDLDTLSLD
DAETYELYSRGDTDGVFQVESSGMRQYLRMLRPTCFDDIIAMLALYRPGPLGSGMVDEFI
KRKHGEVPVTYPVPSLEACLQPTYGVIVYQEQVMQIAQIVGSYTLGGADLLRRAMGKKIA
EAMAEERTKFVQGAQKNDIPKEKANEIFDLMEKFAEYGFNKSHSAAYALISYYTAFLKVH
FPVEFMAALLTSEMGNQDKLLKYVAACKDMDIEVLRPNVQVSRREFTVHEGRIVFGLGGI
KNVGDEAIREIVDAREEGGPYASLLDMCVRVNLRKVTKRVIENLIKGGACDCLGCTRAGM
LASLDTVVARAQKKLKERDSNQVSLFTMIKEEPKVCPGIGFDCEEQTAPEWPDDQKLRFE
KEALGFFLTSHPLQPYRKELFRLRLTPLEEARDMPPGAEIRTAVLVTTLKELMTKKGQRM
AFAGVEDLTASAEVVFFPEPFAEARELLKSDQPLLLEGTLDKKADDGNGGQGQGGDDEEA
APRDIKIMGAKVMPLAMACCSSDEPVIVELDTRRMSADYLAGLRAILEKHKGTVPVNVHM
VVDESLCLLQLGPRWTVQPGPVFENDLNKWTHGGM
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcacctttcacgcacagaagagaacatgtcagatttcgtacacttgcactgt
catacggaatacagcctcctcgacggggccatccgtctgaaggacctcggcgcacgcgcc
aaggactacggcatgaccgccgccgccatcaccgaccacggtaacctcttcggcgcggcc
tatttctacaccacctgcaagtcgttcggcatcaagcccatcatcggctgcgaggtgtac
gtcgccgccacagaccgcaccgacaagacctccgaattcgcgcgcacccggtaccatctc
gtgctgctggcgcagaacaacgaaggctaccacaacctcgtgcgccttgtgacacgcggc
ttcacggagggcttccactacaagccccgcgtggacaaggaactgctgcgcgaatacagc
gacggactcatcgccctttcagcctgcctcgcaggtgaagtgccgcgcgtgctcatgaag
cagggcatggatgcgggcatagccaccgcgcaggaatacgcctccatatttcccggccgc
ttctaccttgaactgcaatccaacggcatcaaggaacaggaagtcctcaacgagaagctc
atcgaacttgcaggccacacgaaccttccccttgtcgccaccaacgactgccactacctc
gacgccaccgacgtggaggcgcacgacatccttctgtgcatccagacgcagaccacggtg
gacgacccgaagcggatgcgcttcgagacgcgcgaactctactacaagtcgccggaggag
atggaaaaggccttcgcccatgtgccggaggccatcgccaacacggggcgcatcgccgag
atgtgcaatatcgagatgagcttcgggaagtacttcttccccgtctatgaactgccagag
ggcatgaccctcgacaccgaattccagcgcctcgccgaagaaggcctgaagaagcgtctc
gaaaagcaccccgaccgcgacaccatcgaccacaaggcctactgggaccgcctcgaatgg
gaactcaaggtcatcacagacatgggttttccggggtacttcctcatcgtgcaggacttc
atcaactgggccaagaacaacggcatccccgtcgggccggggcgtggttcggctgccggg
tcgctggtggcatggtcgctgcgcatcaccaacctcgaccccatcccctacgacctgctg
ttcgagcgctttctcaacaacgaacgcgtcagcatgccggatatcgacgtggacttctgc
gaacgtcgtcgcaccgaagtcatacggtacgtcgccgaaaaatacggtgaagattcagtt
tcgcagataaccaccttcggcaagatgaaggccaaggcggtggtgcgtgacgtgggacgc
gcccttggcatgtcgttcggcgagaccgaccgcatcgccaagctcatccccgaagacctc
aagatgaccatcaagaaggctcttgaggcagaacccgaccttgccacgctctaccgggac
gacccgcagatacgcaagctgctggatgtctccatgcgccttgaagggctttcgcgccac
gcctccacgcacgcggcgggcgtggtcatatccgacaagcccatgtcggagtatctgccg
ctgtacaagggaaagaagggtgaaaccgtcacccagttcgacatgaagatggtcgagaag
gtcggcctcgtcaaattcgacttcctcggcctgcgcaccatgaccctcgtgcaggatgcg
ctggacgaaatcacacgacagggcaagaccccgcccgacctcgacacgctctctctcgac
gatgccgagacctatgagctgtactcgcgcggcgacaccgacggggtgttccaggtcgaa
agctcgggcatgcggcagtatctgcgcatgctgcggcccacctgcttcgacgacatcatc
gccatgctcgccctctaccgccccggcccgctgggttcgggcatggtcgacgagttcatc
aagcgcaagcatggcgaggtgcccgtcacctaccccgtgccttcactcgaagcgtgcctg
caacccacctacggcgtcatcgtctatcaggaacaggtgatgcagatcgcccagatagtg
ggcagctacacgctgggcggcgcagaccttctgcggcgtgccatgggcaagaagatcgcc
gaggccatggccgaggagcggacgaagttcgtacaaggcgcgcagaagaacgacatcccc
aaggagaaggccaacgagatcttcgaccttatggagaagttcgcggaatacgggttcaac
aagtcgcacagcgcggcctatgccctcatctcgtactacacggccttcctcaaggtgcat
ttcccggtcgagttcatggccgccctgctcacctcggaaatgggcaaccaggacaagctg
ctcaagtatgtcgccgcctgcaaggacatggacatcgaggtgctgcgacccaacgtgcag
gtgagccgacgcgagttcacggtgcatgagggacgcatcgtcttcggtcttggcggcatc
aagaacgtgggcgacgaagccattcgcgaaatcgtcgacgcacgcgaagaaggcgggccc
tacgcctcgctgctcgacatgtgcgttcgcgtcaacctgcgcaaggtcaccaagcgcgtc
atcgagaatctcatcaaaggcggtgcgtgcgactgtctcggctgcacacgcgccgggatg
ctggcatcgctggacaccgtggtggcgcgcgcccagaagaagctcaaggaacgcgactcg
aatcaggtctcgctcttcaccatgatcaaggaagagcccaaggtctgccccggcatcggc
ttcgattgcgaggaacagaccgcccccgaatggcccgacgaccagaagctgcgcttcgag
aaggaggctctcggcttctttctcaccagccacccccttcagccctaccgcaaggaactc
ttcaggctgcgcctcacccctcttgaagaggcccgcgacatgccccccggcgccgagata
cgcacggcggtgctcgtcaccacgctcaaggagttgatgaccaagaagggccagcgcatg
gcgttcgcgggtgtggaagacctcacagcctctgccgaggtggtcttctttcccgaaccg
ttcgccgaggcgcgcgagttgctcaagtcggaccagcccctgcttctggagggcacactc
gacaagaaggccgacgatggcaacggcgggcaggggcaagggggtgatgacgaggaagcc
gcgccgcgtgacatcaaaatcatgggtgccaaggtcatgccgctggcgatggcctgctgt
tccagcgatgagcccgtcatcgtcgaactcgacacccgtcgcatgagcgcggactatctc
gcgggcttgcgcgccatcctcgaaaagcataagggcaccgttcctgtgaacgtgcacatg
gtggtcgacgaatcgctgtgcctcctgcagctaggcccgcgctggacagtccagcccggc
cccgtgttcgagaacgacctcaacaaatggacccacggaggaatgtag
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