Nitratidesulfovibrio vulgaris DP4: Dvul_2087
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Entry
Dvul_2087 CDS
T00452
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvl03016
]
Dvul_2087
Enzymes [BR:
dvl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Dvul_2087
Transfer RNA biogenesis [BR:
dvl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Dvul_2087
Prokaryotic type
Methylthiotransferases
Dvul_2087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABM29103
UniProt:
A0A0H3A8Z9
LinkDB
All DBs
Position
complement(2425175..2426551)
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AA seq
458 aa
AA seq
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MKGATTSFHAATFGCKVNQYETQSLREAWLRRGFTEVDTPEGADVILVNTCAVTARAVSD
VRRAIARLHRAAPAAGIVVTGCAAQVLREEFAGLPGVVAVVPQEAKATLAAYDPAAAIMP
PVSTHDAHCDAATAQASSATSGDVVPAQASVFPDFRIEGFRRARPVVKVQDGCSHRCTYC
IVPLTRGASRSREPGEVVAELRRLLDAGFREVMLSGVNLRLYGRDLSGAGDFWDLLQRVE
RELAPEWAGRARLRISSLEPGQLGAHALDVLGGSRLVCPQLHLSLQSGSPDVLRRMGRGH
YSPAPLLDFLRDLGGTWPVFGLGADILMGFPGESEDAFAETLDFARALPLTYAHVFPYSR
RPGTVAASLPEHLPQEIRKARAAAVRDVVAQKRAVFAERLAGLPALSVVLDGAGARKGIS
EYYAECRVRRVPHGHDHRAVLTVRPVGVEAGCVVTEAV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgcgacgacctcgttccatgccgccacgttcggctgcaaggtcaaccagtac
gagacgcagtcgctgcgagaggcgtggctgcggcgtggtttcaccgaggtggacaccccg
gagggggctgacgtcatcctcgtcaacacctgtgcggtcacggcccgtgctgtaagcgat
gtgcggcgtgccatcgcccggctgcaccgtgcggccccggctgcgggtatcgtggtgacc
ggatgcgcggcgcaggtgctgcgcgaggaattcgcaggactgcccggcgtggtggcggtg
gtgccgcaagaggccaaggccactctcgcggcgtacgaccccgcagcggccatcatgccc
cccgtctcgacgcatgatgcgcactgcgatgccgctacggcgcaggcgtcgagtgccacc
tctggcgatgtcgtccctgcacaggcgtcggtcttcccggacttccgcatcgagggcttt
cgccgtgcccgccccgtggtcaaggtgcaggatggctgttcgcaccgctgcacctattgc
atcgttccgctcacgcggggggcttcacgcagccgcgaaccgggtgaggtcgtcgcagaa
ttgcgccgtctgctcgatgccgggttccgcgaggtgatgctgtcgggcgtcaacctgcgc
ctgtacgggcgcgacctctccggtgcgggcgacttctgggacctgctgcaacgggtcgaa
cgcgaactggccccggagtgggccggaagggcccgcctgcgcatcagttcccttgagcct
gggcaactcggggcacatgccctcgacgtgctcggcgggagcaggctcgtctgcccgcag
ttgcatctttcgttgcagagtggcagccccgatgtgcttcgccgtatgggacgcgggcac
tacagccctgcccccctgcttgatttcttgcgcgacctcggcggaacatggccggtcttc
ggcctcggtgcggacatcctgatgggctttccgggcgagagcgaagacgcattcgccgag
acgctggacttcgcccgtgctttgccgctcacatacgcccacgtctttccgtattcgcgg
cgtcccggcactgtggcggcctctttgccggaacacctgccgcaggagatacgcaaggca
cgtgcggcggcggtacgtgacgtcgtggcgcagaagcgggcggtctttgccgaacgtctt
gccgggttgcctgccctttcggtggtgcttgacggggcgggtgcacgcaagggaatatca
gagtattatgccgaatgccgggtgcgccgtgtgccgcacgggcatgaccaccgggccgtg
ctgactgttcgcccggtgggagtggaagccggctgcgtggtcaccgaagccgtatag
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