Nitratidesulfovibrio vulgaris DP4: Dvul_2812
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Entry
Dvul_2812 CDS
T00452
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03420
Nucleotide excision repair
dvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dvul_2812
03430 Mismatch repair
Dvul_2812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvl03400
]
Dvul_2812
Enzymes [BR:
dvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dvul_2812
DNA repair and recombination proteins [BR:
dvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dvul_2812
MMR (mismatch excision repair)
Other MMR factors
Dvul_2812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
PAH
AAA_11
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-ProteinID:
ABM29823
UniProt:
A0A0H3AD77
LinkDB
All DBs
Position
complement(3271700..3273859)
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AA seq
719 aa
AA seq
DB search
MIEFAKELNAAQYEAVTTLDGPVLVIAGAGSGKTRTVVYRLANLLERGVPASSILLLTFT
RKAANEMLQRASRLLGYGVQGIAGGTFHAFAYSLLRQYHPARLEGRDLTIMDGADSVAAI
QHCKDALGIARGDKSFPKTQTVLSLLSKSRNKELPLDEVLRREAYHLLVHADGVSRIGEA
YAEYRAEHGLLDYDDLLFEVERLLRERPDLLAHLRDRYRYIMVDEYQDTNLVQARLVQLL
AGEGGNVMAVGDDAQSIYAFRGANVQNILSFPQFFPGTRIIKLEENYRSTQPVLDLTNAI
LAEAPQAYRKHLYTSREDGVLPQVVRPLSDLTQASIVVSRVSELLRTYPPHEIAVLFRAG
FHSYHVEVQLNKLGIRFRKYGGVRYSEAAHVKDVMAYARLVLNPLDLPAFQRVAALSRGV
GPKTTLRLYEVARQGDAAATAHACARYPQLRADLELLDRLRKRTPAPSTLLEEVIEHYQP
RLEAAYPDDWPRRQQGLEQLVQIASAYRDLDLFISDLSLEDPGTEEEDRDSVVLSTIHSA
KGLEWSAVIILDLVEDRFPSRHAVTRADDFEEERRLMYVACTRARERLMLFVPSSLYQRG
EGGNQPAAPSPFVRELPAALYEEWYESYTGGLQRRDTSRPVARPAVASTFGCAPRPESAP
VPGGPSPVAGAAKLGFCTHKIFGRGKIVQHLPPDKYRVNFPGVGLKVILGDYLTLEDDA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatagaattcgccaaagaactcaacgcggcccagtatgaggccgtgaccacactcgac
ggcccggtgctggtcatcgccggtgcgggcagcggcaagacgcgcacggtggtctaccgc
ctcgccaacctgcttgagcgcggcgtgcccgcctcgtccatcctgctgctgaccttcacc
cgcaaggcggccaacgagatgctgcaacgcgccagccgcctgctgggctacggggtgcag
ggcatcgccgggggcaccttccacgccttcgcctattcgctcttgcgccagtaccatccg
gcacgccttgaggggcgcgacctgaccatcatggacggggccgacagcgtggccgccatc
cagcactgcaaggatgcgctcggcatcgcgcggggggacaagtcgttccccaagacgcag
acggtgctgtcgttgctcagcaagtcgcgcaacaaggaactgccgctggacgaagtgctg
cgccgcgaggcgtaccacctgctggtacatgcagacggggtctcgcgcatcggcgaagcc
tacgccgaatatcgcgcggaacacggcctgctggactatgacgacctgctcttcgaggtg
gagcgcctgttgcgcgaacggcccgacctgctggcccacctgcgcgacagataccgctac
atcatggtcgacgagtatcaggacaccaacctcgtgcaggcgcggctggtgcagcttctg
gcgggagagggcggcaacgtcatggccgtgggcgacgacgcccagtccatctacgccttt
cgcggtgccaacgtgcagaacatcctgtcgttcccgcagttctttccgggtacgcgcatc
atcaagctggaagagaactaccgttccacccagccggtgctcgacctcaccaacgccatc
ctcgccgaggcgccgcaggcctaccgcaagcacctgtacaccagccgagaggacggggtg
ctgccgcaggtggtgcgacccttgagcgacctcacgcaggcatccatcgtggtgagtcgc
gtgagtgaactgctgcggacgtatccgccccatgaaatcgccgtgctgttccgggcgggg
ttccactcgtaccatgtggaggtacagctcaacaaactgggcatccgcttccgcaagtac
ggcggggtgcgctattccgaggccgcgcacgtcaaggacgtgatggcctacgcccgcctt
gtgctcaaccccctcgacctgcccgcgttccagcgtgtggcggccctgtcgcgcggtgtg
ggaccaaagaccaccctgcgcctctacgaggtcgcccggcagggtgacgcggcggcgacg
gcccatgcctgcgcccggtatccgcaactgcgggccgaccttgaactgctcgacaggctt
cgcaagcgcacacctgcgccttccacgttgctggaagaggtcatcgagcattaccagccg
cgtctcgaagccgcctaccccgacgactggccgcgcagacagcaggggcttgagcagctt
gtgcagatagcctcggcctatcgcgacctcgacctcttcatctcagacctgtcgctggaa
gaccccggcaccgaggaggaggaccgcgacagcgtggtgctgtccaccatccattccgcc
aaggggcttgagtggagtgccgtcatcatcctcgacctcgtggaggacaggttcccgtcg
cgccatgccgtgacgcgcgccgacgacttcgaggaggagcgtcgcctcatgtacgtggcc
tgcacccgcgcccgcgaacggctcatgctcttcgtgccgtccagcctctaccagcgcggg
gagggtggcaaccagcccgccgcgcccagccccttcgtccgggagttgcccgcggcactg
tacgaggagtggtacgagagctataccggaggtctgcaacggcgtgatacgtcgcgtccg
gttgcgcgtccggccgtggcatccaccttcggttgcgcaccgcgtcccgaatcggcaccg
gtgcccggcgggccgtcgcccgttgcaggggcggcgaagctggggttctgcacgcacaag
atcttcgggcggggcaagatcgtccagcatctgccgcccgacaagtacagggtgaacttc
cccggcgtggggctcaaggtcatcctgggcgactatctgacgctggaggatgacgcatga
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