Nitratidesulfovibrio vulgaris DP4: Dvul_2920
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Entry
Dvul_2920 CDS
T00452
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvl01011
]
Dvul_2920
Enzymes [BR:
dvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dvul_2920
Peptidoglycan biosynthesis and degradation proteins [BR:
dvl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dvul_2920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM_OapA
SLT_2
NMB0315_dom_I
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
ABM29931
UniProt:
A0A0H3ABY0
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Position
3417197..3418960
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AA seq
587 aa
AA seq
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MQRTRRRYRISPARRLLLMMLALVALSISVSGCATRKPLSSLPADKETACPAPEKSSGSS
DEVVELAIPPVDDGLPLSPAEQAALASTGEVDRNLSPEDYRAVVLHFKYYTHRARGTMER
LARRSQNYLPYVREVLRKRGLPEELAYLAIVESGYNPNAVSSSGAVGIWQFMPYTGKLYG
LDYDWWIDERRDPYKATHSAASYLAKLYGDFNDWHLALAAYNAGEGKIGRALAGTGAKGF
FELVRRNESLDEKARLKDETKQYVPRFIAITKIMRNLQSLGFAPLDTSCAIRPVEVRVRP
GTDLMALAQASGMSWASFSDLNPAFRRYVSPPDAHSVIYLPEARREAALAYLAKPQTRNY
AGWQPYTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIPGGTHHEPDTGPA
IKRALAERRGSYIVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLYIPGGSEA
PAPQPVATSKPEKPQAPVARATSTPEPRQLVASVTAMPVSAAKAPSRSAGPSAAVKTKTV
TYKVQQGDTMWAIARKFNVHPKELMRQNRLEMDTVLRPGDSITVTQE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaacccgccgccgctacagaatatccccggcccgcaggcttcttctgatgatg
ctggcccttgttgccctctccatctccgtatcgggctgtgccacgcgcaagcccctttct
tcgcttcccgccgacaaggagacggcctgccccgcgccggagaaatcctccggcagcagt
gacgaggtggtcgaactcgccatcccccccgtggatgacggcctgcccctctcgcccgca
gaacaggccgcgctggcatccaccggcgaggtcgaccgcaacctctcccctgaagactac
cgcgccgtcgtcctgcatttcaaatactacacccacagggcgcgcggcaccatggagcgt
ctggcccgccgttcgcagaactatctgccctacgtccgcgaagtgcttcgcaaacgcggc
ctgcccgaagaactggcctatctcgccatcgtcgagagcgggtacaaccccaatgccgtc
tcgtcgtccggtgccgtgggcatctggcagttcatgccctacaccggcaaactctacggc
ctcgactacgactggtggatagacgaacgccgcgacccctacaaggccacccattccgcc
gcgtcgtaccttgccaagctctatggcgacttcaacgactggcacctcgccctcgccgcc
tacaatgccggtgagggcaagataggtcgcgcgcttgccgggacgggggccaagggcttc
ttcgaactggtgcgccggaacgagagcctcgacgagaaggcccgtctcaaggacgagacc
aagcagtacgtgccccggttcatcgccatcaccaagatcatgcgcaacctccagtcgctc
ggtttcgccccgctcgacacctcgtgcgccatccggcccgtcgaggtgcgtgtccgcccc
ggtacggacctcatggcccttgcgcaggcttccggcatgagctgggcgtccttctccgac
ctgaacccggctttccggcgctatgtcagcccgcctgacgcccactccgtcatatatctt
ccggaggcacgccgcgaagcggccctcgcctacctcgccaaaccgcagacccgcaactat
gcaggctggcagccctacaccgtgcgcaagggcgacacgctggagcgcgtcggcaagcgc
gccggggttcccgtatcggtgctgaagcaggtcaacaaggtgcgcagcaacaacctcaag
gtcggcagcacactgctcatccccggcggtacgcatcacgaacccgacaccgggcccgcg
atcaagcgcgcccttgccgaacgccgcggcagctacatcgtgaaacagggcgataccctc
tacagcatcgcacgcacacagggcgtcgaactgaacaccctgatgcaggccaatggcatg
gcagaggcgcacaccctgcgcgtggggcagaagctctacatccccggcgggtccgaagcg
cctgcgccgcagcctgtcgcgacaagcaagccggagaagccgcaggcccctgtggcacgc
gccacatccaccccggaacctcgccagctggtcgccagcgtgaccgccatgcccgtatct
gccgccaaggccccctcgcgcagcgcagggccctccgccgccgtcaagacgaagaccgtc
acctacaaggtgcagcagggtgacaccatgtgggccatcgcccgcaagttcaatgtccac
cccaaagaactgatgcgccagaacaggctcgaaatggatacggtgttgcggcccggcgac
tccatcaccgtgacgcaggaatag
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