Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0061
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Entry
DvMF_0061 CDS
T00816
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DvMF_0061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_0061
Enzymes [BR:
dvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DvMF_0061
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DvMF_0061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_PriA
PriA_C
DEAD
ResIII
Helicase_C
PriA_3primeBD
AAA_30
AAA_16
AAA_25
SLFN-g3_helicase
SRP54
Motif
Other DBs
NCBI-ProteinID:
ACL07022
UniProt:
B8DN78
LinkDB
All DBs
Position
79119..81539
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AA seq
806 aa
AA seq
DB search
MSTNPVPSLRAVALLSPPYATLTYAVPPWLPPQAWRRGTRVAVPLGNGAVRVGVLLDDET
HAAAGGGALPEGVVPRPMLWPLEREPLLGAGYLDMVRQLALRQAVSEGQILGNFLPVGLR
TTQVRLRFFEDGRARTLKFRDLVPLADKDPSALHRLGQAWMDGRGEVLDKAEDAADAELC
AVTADPPWPVRPSAVRQVQLLEYLWDKGSASRRAMLRDLGAASATALEGLLKRGLVAVTR
RDDGECVCDEAAEGEGPACLYGPPDASFELNANQRTALDDFLAALDGPRAEHRLLYGVTG
SGKTAVYLDLARECLARGRSVMLLAPEVALACKLRRDVNERLPGAPLFFFHGYQGPAQRE
RTFRALAARREPCLVVGTRSALFLPAPDLGVVVLDEEHDTSFKQDEGLAYQAKEVAWFRV
GQGAGLLVLGSATPDVKTFHAMHEGRLPMATLPERAGGGTLPDVELVDIKDISSTDSVLA
ARSGAALRETVERGEQAVILLNRRGYAPLMYCLDCGTVARCPHCDIGLTYHKGRERLVCH
YCGHSVPYPATCPNCKCMHYLPMGEGTEKLEETLAAHLPAGGKVLRLDRDSTRRPGRMEE
ILGAFARREAQVLVGTQMLSKGHHFPDVTLAVVADGDLGLNLPDYRAAERTFQLLVQSAG
RAGRGEKPGRVLIQTRDPSHYCWNFVRTADYEGFYAHEIAIRQRRRYPPFVRLALVRISY
PMDFTGGAEELARFANAVRAQGRERGVQVLGPAPSPLPLLRGRKRFQCLLKADDWPSIRS
LFGTAGATPGIGHLRISLDLDPVNMM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaatcccgtcccatcattgcgcgccgtcgcgctgctcagtccgccgtacgcc
acgctgacgtacgccgtgccgccgtggctgccgccccaggcgtggcggcggggcacgcgg
gtggcggttccgctgggcaacggcgcggtgcgcgtgggcgtgctgctggacgacgagacg
cacgcggcggcaggcgggggggcgctgccggaaggcgtggtgccccggcccatgctgtgg
ccgctggagcgcgagccgctgctgggcgccgggtatctggacatggtgcgccaactggcg
ttgcggcaggcggtgagcgaaggccagatactgggcaacttcctgcccgtggggttgcgc
accacccaggtgcggttgcgttttttcgaggacggcagggcgcgcacgctgaagttccgc
gaccttgtgccgctggcggacaaggatccttccgccctgcaccgtctgggccaggcctgg
atggatgggcggggcgaagtgctggacaaggccgaggacgccgccgacgcggaactgtgc
gcggtgacggcggacccgccgtggccggtgcggccttccgccgtgcgccaggtgcaactg
ctggaatacctgtgggacaaggggtcggccagccgccgcgccatgttgcgcgaccttggc
gctgcctccgccacggcgctggaggggctgctgaagcgcggccttgtggcggtgacccgg
cgtgacgacggcgaatgcgtctgcgacgaggccgccgaaggcgaaggcccggcctgtctg
tatggtccgccggatgcttcgttcgaactgaacgcgaaccagcgcacggctctggacgac
tttctggccgcgctggacggtccgcgcgcggaacaccgcctgctgtacggcgtgaccggc
agcggcaagacggcggtatacctggaccttgcgcgcgaatgcctggcgcgggggcgttcg
gtgatgttgctggcgccggaagtggcccttgcctgcaagctgcgccgcgacgtcaacgaa
cgactgcccggcgcgccgctgttcttctttcacggctatcagggaccggcccagcgcgaa
cgcacctttcgcgcgctggcggcccggcgcgagccgtgcctagtggtgggaacccgctcg
gccctgttcctgcccgcgcccgaccttggcgtggtggtgctggacgaggagcacgacacc
tcgttcaagcaggacgagggactggcctatcaggccaaggaagtggcctggttcagggtg
gggcagggcgcgggactgctggtgctgggctccgccacgccggacgtgaagaccttccac
gccatgcacgaggggcgcctgcccatggcaaccctgcccgagcgggccggtggcggcacc
ctgcccgacgtggaactggtggacatcaaggatatttcctccaccgattccgtgctggcc
gcccggagcggcgcggccctgcgcgaaacggtggaacgcggcgagcaggcggtgatcctg
ctgaaccggcgcggctacgccccgctgatgtattgtctggactgcggcaccgtggcccgc
tgcccgcactgcgacatcggcctcacctaccacaaggggcgcgagcggctggtgtgccac
tactgcggtcattcggtgccgtatccggccacctgccccaactgcaagtgcatgcactac
ctgcccatgggcgagggcacggaaaagctggaggaaaccctggcggcgcacctgcccgcc
gggggcaaggtgctgcggctggaccgcgactcgaccagaaggccgggccggatggaggaa
atcctgggggcctttgcccggcgcgaggcgcaggtgctggtgggcacccagatgctctcc
aaggggcaccactttccggacgttaccctggccgtggtggccgacggcgaccttggcctg
aacctgccggactaccgcgcggcggaacgcaccttccagttgctcgtgcagtccgccggg
cgggccgggcgcggtgaaaagccgggccgggtgctcatccagacccgcgatccttcccac
tactgctggaatttcgtgcgcacggccgattacgagggcttttacgcccacgagattgcc
atccgccagcggcgcaggtaccctccgttcgtgcggctggcgctggtgcgcatcagctat
cccatggatttcacgggtggggcggaggaactggcccgcttcgccaatgctgtgcgcgct
caggggcgcgagcgcggcgtgcaggtgctggggcctgccccctcgccgctgccgctgttg
cgcgggcgcaagcgtttccagtgcctgctgaaggccgacgactggccgagcatccggtcg
ctgttcggcactgcgggcgccacgccgggcatcggccacctgcgcatctcacttgattta
gatccggtcaacatgatgtag
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