Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0105
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Entry
DvMF_0105 CDS
T00816
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DvMF_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvm03021
]
DvMF_0105
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_0105
Enzymes [BR:
dvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DvMF_0105
Transcription machinery [BR:
dvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DvMF_0105
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DvMF_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACL07066
UniProt:
B8DNK9
LinkDB
All DBs
Position
113673..114716
Genome browser
AA seq
347 aa
AA seq
DB search
MLIKQGDRLINTRNWSELVKPEQITRDSDPADAMYGKFVCEPLERGYGTTIGNALRRVLL
SSLQGAAFVSVKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKG
AVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIK
LDSSFAPVRKVAYTVEQARVGQMTNYDKLIIEVWTDGSVTPEDAIAYSAKIIKDQISVFI
NFDERISGESSGNSSGSSDVNENLFKGIDELELSVRATNCLKSANITLVGELVQKSENEM
LKTKNFGRKSLDEIKRVLCDMSLDFGMKVDGFEKKYQEWKRKQQNEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaacaaggcgacaggcttatcaacacccggaactggtcggagctggtgaag
cccgaacagatcacccgggacagcgacccggccgatgccatgtacggcaagttcgtgtgc
gaaccgctggaacgtggctacggcaccaccatcggcaatgcgctgcgtcgggttctgctg
tcgtcgcttcagggcgcggcgttcgtctcggtgaaggtctcgggcgtacagcacgagttc
accaccattcccggcgtgctcgaggacgtgaccgacatcgtcctcaacctgaagcaggtg
cgtcttgccatggacacggacgagccccagttcctggagctttccgtgaacaagaagggc
gcggtgaaggccggcgacatcaagaccaaccagcacgtgatggtcctcaaccccgacctg
cacatcgccacgctgaccgaagacctggaactcaccttcgagttcgaggtgcgcatgggc
aagggctacgtgcccgcggacatgcacgaaggcctcagcgaagagatcgggctgatcaag
ctggactccagcttcgccccggtccgcaaggtcgcctacacggtggagcaggctcgcgtc
ggccagatgaccaactacgacaagctcatcatcgaggtctggaccgacggttccgtgacc
cccgaagatgcgattgcgtacagtgccaagatcatcaaggaccagatatccgtcttcatc
aacttcgatgaacgcatttcgggtgaaagttccggcaattcgtcgggcagcagcgacgtc
aacgagaacctgttcaaggggatcgacgaacttgagctgtccgtgcgcgccaccaactgc
ctgaagagcgccaacatcaccctggtgggcgaactggttcagaagtccgagaacgaaatg
ctgaagaccaagaacttcggtcgcaagtcgctggatgaaatcaagcgggtgctgtgcgac
atgagcctggacttcggcatgaaggtcgacggcttcgagaagaaataccaggaatggaag
aggaagcagcaaaatgaggcatag
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