Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0122
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Entry
DvMF_0122 CDS
T00816
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DvMF_0122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_0122
Enzymes [BR:
dvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DvMF_0122
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DvMF_0122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
LPD7
Motif
Other DBs
NCBI-ProteinID:
ACL07083
UniProt:
B8DNM6
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All DBs
Position
133898..135433
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AA seq
511 aa
AA seq
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MHEHRICNAMSTIYTVGELTRAIRAAVEGGFPFVWVRGQVSNLSRPASGHCYFALKDEDA
VLNCVWFRGNQRDAEHFDPMTGEVFEDGPRPGLARTMANGQELLCAGRLTVYPPRGGYQL
VVEMAQDAGLGRLHAQFEALKARLAERGYFDAARKRPLPRHPKRVAVITAPSGAAVRDFL
RMADERGWGCEIRIHPVPVQGDEAPPRIAAALAEVVAQGWAQVVVLIRGGGSLEDLWAFN
DERVATAVFGSPLPVLAGIGHEVDHTMADMTADVRAATPTHAAQLLWPERRELAQRVDEL
EMALTRGMERRFARLDEQLGALARGLAWLSPERALARLDERFADAAARLGRAWEMLARRD
AARLDAADAALTRTLGPEAWERRERAVDALEARLRWAGERAVTGREHELERCALRLDALD
PLRPLERGYSLVRRADGGFLRSVAEVASGDALAVLVRDGEVDVTVRGARPGGMLEQGGAD
DAGRTAGNGGNGGNGGNAGTGATERGAGDIS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacaccgcatctgcaacgccatgagcaccatctacaccgtgggtgaattgacc
cgggccatccgggccgccgtggagggcggatttccctttgtgtgggtgcgcgggcaggtg
agcaacctgtcgcgcccggcctcggggcattgctatttcgcgctcaaggacgaggacgct
gtgttgaactgcgtgtggttccggggcaaccagcgcgacgcggaacatttcgaccccatg
accggcgaggtgttcgaggacgggccgcgccccggccttgcgcgcaccatggccaacggc
caggaactgctgtgcgcggggcggctgacggtgtacccgccgcgcggcggctaccagctg
gtggtcgaaatggcgcaggacgcgggcctggggcggctgcacgcgcagttcgaggcgctg
aaggcccgccttgccgagcggggatatttcgacgcggcccgcaagcgtccgctgccgcgc
catccgaaacgggtggcggtgatcacggctccaagcggggcggcggtgcgcgactttctg
cgcatggcggacgagcgcggctggggctgcgagatacgcatccacccggtgccggtgcag
ggcgacgaggcccccccgcgcattgcggcggcgctggccgaggtggtcgcgcagggctgg
gcgcaggtggtggtgctgatccggggcggcggttcgctggaagacctgtgggccttcaac
gacgagcgggttgccacggcggtgttcggcagccccttgccggtgctggcgggcatcggt
cacgaggtggaccacaccatggccgacatgaccgccgacgtgcgcgcggccacgcccacc
catgcggcgcagttgctgtggccggaacggcgtgaactggcgcagcgcgtggacgaactg
gaaatggccctgacgcgcggcatggagcgccgctttgcccggctggacgaacagttgggt
gcgctggcgcgcggactggcctggctgtcgccggagcgggcgttggcccggctggacgaa
cgttttgccgatgcggcggcccgtttgggccgggcgtgggagatgctggcccggcgcgat
gcggcgcggctggacgcggcggacgcggcattgacccgcacgctggggccggaggcgtgg
gagcggcgtgaacgcgccgtggacgcgctggaagcgcgcctgcgctgggcgggcgagcgc
gccgtgaccgggcgcgaacacgagttggaacgttgcgccttgcggctggacgcgctggac
ccgctgcgcccgctggagcgcggctacagcttggtgcgccgggccgacggcggctttctg
cgcagcgtggccgaggttgcctccggcgatgcgctggccgtgctggtgcgcgacggcgag
gtggacgtgaccgtgcgcggcgcgcggcccggagggatgctggagcagggcggcgcggac
gatgctggccgcaccgcaggaaacggcggaaacggcggaaacggcggcaatgccggaacg
ggcgccacggagcggggcgccggagatatttcgtga
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