Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0318
Help
Entry
DvMF_0318 CDS
T00816
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03030
DNA replication
dvm03430
Mismatch repair
dvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DvMF_0318
03430 Mismatch repair
DvMF_0318
03440 Homologous recombination
DvMF_0318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvm03032
]
DvMF_0318
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_0318
Enzymes [BR:
dvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DvMF_0318
DNA replication proteins [BR:
dvm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DvMF_0318
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DvMF_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
ACL07275
UniProt:
B8DPI8
LinkDB
All DBs
Position
369894..370697
Genome browser
AA seq
267 aa
AA seq
DB search
MKRLLRRLLSGSGPDPATPLRGMVFVSLDCEMTGLNPARDDLLAVGAVVLRGMRLDLSAT
FRGLLRPACPVRPEGVPVHGILPGEAAHGDEAAAQLARLDAWLAGCAAVPGAGNGAEAPV
VLLGWCLGLDEAFLAAGRKRAGLPARTHPRCDVLDLFRHVRARGVAAPSGQGAMPPSGAS
PLPSTHAALADIPLKDADLYAVARALGVDVHGAHDALGDACMCAQVFQRLVPLLERGLGR
RAVWGDLARAANAATCGARNGGGGFGL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctgctgcgccgcctgctgtccggcagcggcccagacccggccacgccgttg
cgggggatggtcttcgtgtccctggactgcgagatgaccggcctgaacccggcccgcgac
gatctgctggccgtgggggccgtggtcctgcggggcatgcgcctggatctttccgccacc
tttcgcggcctgttgcgcccggcctgcccggtgcggcccgaaggtgtgcccgtgcacggc
attttgcccggagaagcggcccacggggacgaggcggcggcgcaactggccagactggac
gcctggcttgccgggtgcgccgcagtgccaggcgcgggaaacggggcagaggcgccggtg
gtgctgctgggctggtgcctggggctggacgaggcctttctggccgccgggcgcaagcgg
gccggattgcccgcccggacgcatccccgctgtgacgtgctggacctgttcaggcacgtg
cgggcccggggcgtggctgcgccctccggtcagggggcaatgcccccttccggcgcatcc
ccgctgccgtccacgcacgccgcgctggcggacatccccctcaaggatgcggacctgtac
gcggtggcccgtgcgctgggggtggatgtgcacggcgcgcatgacgcactgggcgatgcc
tgcatgtgcgcgcaggtcttccagcgtctggtgccgctgctggagcggggccttggccgc
agggccgtgtggggagatctggcccgtgccgccaatgcggcaacctgcggagcccgcaac
gggggcggaggcttcgggctgtga
DBGET
integrated database retrieval system
