Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0340
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Entry
DvMF_0340 CDS
T00816
Name
(GenBank) protein of unknown function DUF558
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvm03009
]
DvMF_0340
Enzymes [BR:
dvm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
DvMF_0340
Ribosome biogenesis [BR:
dvm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DvMF_0340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
ACL07297
LinkDB
All DBs
Position
complement(397375..398094)
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AA seq
239 aa
AA seq
DB search
MRTFFLPPERWAEPYLLEGQEARHLVKVVRVRVGDSVRLLDGRGREGEFRVTDTEKALVR
LEPVSITEHPAPASQAVLAIGWGKEVRRGWLMEKAVELEAGGIWLWQAERSQSRVPEETR
ESWHAQMEAGAKQSRNPWLPELRTLPGGVAELAEASRDFAKRFILWEGDTGGVLLGAGDI
GQPGRTLFVVGPEGGFSDREVAALLNSGMQAVSLGNRVLRWETAAMLCLGLHWWARQGR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacctttttcctgccgcccgaacgctgggccgaaccgtacctgctcgaagggcag
gaggcccgccacctggtcaaggtggtgcgggtgcgcgtgggcgactcggtgcgtctgctg
gatggccgggggcgcgagggcgaattccgggtgacggacacggaaaaggccttggtgcgt
ctggagccggtgtcgatcaccgagcatccggccccggcatcgcaggcggtgctggccatc
ggctggggcaaggaagtgcgccggggctggctgatggaaaaggcggtggaactggaggcg
ggcggcatctggctgtggcaggcggagcgcagccagtcgcgcgtgcccgaggaaacccgc
gaatcatggcacgcccagatggaggccggggccaagcagagccgcaacccgtggctgcca
gaactgcgcaccctgcccggcggcgtggccgaactggccgaggccagccgcgatttcgcc
aagcggttcatcctgtgggaaggcgacaccggcggcgtgctgctgggcgccggagacatc
ggccagccgggccgcaccctgttcgtggtgggcccggagggcggtttttccgaccgcgag
gtggcggcgcttctgaattccggcatgcaggccgtaagccttggcaaccgggtgctgcgc
tgggaaacggcggccatgctctgcctggggctgcactggtgggcccggcagggacggtag
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