Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0353
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Entry
DvMF_0353 CDS
T00816
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00300
Lysine biosynthesis
dvm00470
D-Amino acid metabolism
dvm01100
Metabolic pathways
dvm01110
Biosynthesis of secondary metabolites
dvm01120
Microbial metabolism in diverse environments
dvm01230
Biosynthesis of amino acids
Module
dvm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DvMF_0353
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DvMF_0353
Enzymes [BR:
dvm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DvMF_0353
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACL07310
UniProt:
B8DJI8
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All DBs
Position
complement(410826..412076)
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AA seq
416 aa
AA seq
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MHHFQYREGQLYAEGVPVHELASRYGTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSVK
ANSNVHLLRLLADMGAGMDIVSGGELHRALAAGVPGQRIVYSGVGKQDDEIRAALEADIL
LFNVESVQELERINAVAGQMGRTARIGVRINPDVDPKTHPYISTGMRNNKFGLDMEQALA
AYLLARDLPNVQPVGIDCHIGSQLTTLAPFLEALDRVLDFHERLRDLGLAITHLDLGGGL
GITYGEETPPHPREFGEAVSERLRGRGLSLILEPGRVIAGNAGILVGRVIYTKSTPSKNF
IIADAAMNDLVRPSLYQSYHRIAEVQPAGRDEITADVVGPICESGDFLARDRILPDMQQG
ELLAVFSAGAYGFSMSSNYNSRPRAAEVLVDGATARCIRKRETLADLVAPELNAEG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttccagtaccgcgaaggccaactgtacgccgaaggcgtgccggtgcacgaa
ctggccagccgctacggcacgccgttgtacgtctattcggcggccaccctgcgccgccat
ttccaggccttcgacagcgcgttcacaggggtcggtcacctgacctgctattcggtcaag
gccaactccaacgtgcatctgctacgcctgctggcggacatgggcgcgggaatggacatc
gtgtccgggggcgaactgcaccgcgcgcttgccgccggggtgcccggccagcgcatcgtg
tacagcggcgtgggcaagcaggacgacgaaatccgcgccgccctcgaggcggacatcctg
ctgttcaacgtcgaatcggtgcaggaactggagcgcatcaacgccgtggccgggcagatg
ggccgcaccgcgcgcatcggcgtgcgcatcaaccccgacgtggacccgaagacccacccg
tacatatccacgggcatgcgcaacaacaagttcgggctggacatggaacaggccctggcg
gcctacctgctggcccgcgacctgcccaacgtccagcccgtgggcatcgactgccacatc
ggttcgcagctcaccacgctggcgccgttcctggaggcgctggaccgggtgctggacttc
cacgaacgactgcgcgacctcgggcttgccatcactcatctggaccttggcggcgggctc
ggcatcacctacggcgaagaaaccccgccccaccccagggagttcggcgaggcggtgtcc
gaacgactgcgcgggcgcgggctgtcgctgatcctggaaccgggccgggtcatcgcgggc
aacgcgggcattctggtgggccgggtgatctacaccaagtccactcccagcaagaacttc
atcatcgcggacgcggccatgaacgaccttgtccgcccttcgctgtaccagtcataccat
cgcatcgcagaggtgcagcccgccgggcgcgacgagatcaccgccgatgtggtgggcccc
atctgcgaatcgggcgactttctggcgcgcgaccgcatcctgccggacatgcagcagggc
gaacttctggctgtcttctcggccggggcgtacggcttctccatgagctccaactacaac
tcgcgcccccgcgcggcagaggtgctggtggacggcgcaacggcgcggtgcatccgcaag
cgcgaaaccctggcggacctggtggcaccagagctgaacgcagaggggtga
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