Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0355
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Entry
DvMF_0355 CDS
T00816
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DvMF_0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_0355
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DvMF_0355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
AAA_14
AAA_29
Rad17
Stathmin
Motif
Other DBs
NCBI-ProteinID:
ACL07312
UniProt:
B8DJJ0
LinkDB
All DBs
Position
complement(412711..415443)
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AA seq
910 aa
AA seq
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MFEQYLRIKDDYPDALLLYRMGDFYEMFFDDAETAARELQIALTCRNPNADLRVPMCGVP
HHSVEGYITQLLEKGFKVALCDQIEDPREAKGLVKRAVTRVLTPGTVVEDANLDAKGHNY
LGALFWDEEKEAGGFAWLDFSTGEWSGLHAKKAADLWQWVRKMQPRELLVTESAQVPSSM
SLTSTQVVRVPGRAPFDLKAATERLLHAQGVRDTGALGLEGKDELVRSCGALLAYVVQTQ
KQDIIHLAPFRPLNLGRHLIVDEVTERNLEIFRRLDGRKGPGTLWHVLDHTQTPMGGRLL
EERLRHPWREMGPIEETQAAVSWLFERDDTRRDLRAGLDEVYDLERLTTRIFLNRAAPKD
YVALRQSLAALPKVRGVLERTETPHGGYPTDGEARGDGRPPFLRAALKGWDDLSDYFDLL
ERALVDSPPHLVTEGGLFRPGFHAELDELLDLTEHGENMLQQLLAEEQAASGLPRLKLGF
NRVFGYYFELSRTASDAVPEHFVRRQTLANAERFTTPRLKELEEKLVSASDRRKSLEYKL
FQKLRETVSEARPRVLFMADLLAGFDYWQSLAETARRWNWTRPVLAQDADILIREGRHPV
VEAMQGSANFIPNDLRMDEARRLLLITGPNMAGKSTVLRQTAIICLLAQMGSFVPAREAR
LGIADRVFSRVGASDNLAQGQSTFMVEMMETARILRQAGKRSLVILDEIGRGTSTFDGLA
LAWAVVEELARRAGGTIRTLFATHYHELTALEGRIPGVHNMNIAIREWGGEIVFLRRLVP
GPSDRSYGIEVARLAGVPQPVVQRARELLHELEKARDGRGEAPRTARAVLPGLDMPEPKQ
AAKPRALLAARAEPVAHPLLTTLRDLDTDHLTPMGALQLLNEWKLLWGGPAHAEDTVPDQ
PPAAPGDDRD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacagtacctgcgcatcaaggacgactatccggatgcgctgctgctctaccgc
atgggcgacttctacgaaatgttcttcgacgatgcggaaacggcggcgcgcgaactgcag
atcgccctcacctgccgcaaccccaacgccgacctgcgcgtgcccatgtgcggcgtgccc
caccattcggtggaagggtacatcacccaactgctggaaaagggcttcaaggtggccctg
tgcgaccagatagaagacccgcgcgaggccaaggggctggtcaagcgcgccgtgacccgc
gtgctgacccccggcacggtggtggaggacgccaacctcgacgccaagggccacaattat
ctgggcgcgctgttctgggacgaggaaaaggaggcgggcggctttgcctggctcgatttt
tccacgggcgaatggtcgggcctgcatgcgaaaaaggccgccgacctgtggcagtgggtg
cgcaagatgcagccccgcgaactgctggtgaccgaaagcgcgcaggtgccctcgtccatg
tcgctcacctccacccaggtggtgcgggtgccgggccgggcgcccttcgacctcaaggcc
gccacggagcggctgctgcacgcccagggcgtacgcgacaccggcgcgctgggccttgaa
ggaaaggatgaactcgtccgttcctgcggggcgctgctggcctacgtcgtgcaaacccag
aagcaggacatcattcaccttgcgccgttccgccccctgaacctgggccgccacctcatc
gtcgatgaagtgacggagcgcaatctggagatcttccgtcgcctggatgggcgcaagggg
ccgggcacgctgtggcacgtgctggaccacacccagacccccatgggcggtcgcctgctg
gaagaacgcctgcgccacccctggcgcgagatgggccccatagaggaaacccaggcggcg
gtaagctggctgttcgagcgcgatgacacccggcgcgacctgcgggccgggctggacgag
gtgtacgaccttgaacggctgaccacgcgcatcttcctgaaccgcgccgcccccaaggac
tacgtggccctgcgccagagcctggccgccctgcccaaggtgcgcggcgtgctggaacgg
acggaaacgccccacggcggctaccccaccgacggcgaggcgcgcggcgatggccgcccc
cccttcctgcgcgcggcgctgaagggctgggacgacctgtccgactatttcgacctgctg
gaacgcgcgctggtggacagcccgccccacctggtcaccgaaggcgggctgttccggccc
ggcttccacgccgaactggacgaactgctcgacctgaccgaacacggcgagaacatgttg
cagcaactgctggcggaggaacaggccgccagcgggctgcccaggctcaagctgggcttc
aaccgggtgttcggctactacttcgagctgtcgcgcaccgcgtccgacgccgtgcccgaa
cacttcgtgcgccgccagaccctggccaacgcggaacgcttcaccactccgcgcctgaag
gaactggaagaaaaactggtctcggccagcgaccgccgcaaatcgctggaatacaagttg
ttccagaagctgcgcgaaaccgtgtccgaggcgcgcccccgcgtgctgttcatggccgat
ctgttggcagggttcgactattggcagagccttgcggaaacggcccgccgctggaactgg
acccgccccgtgctggcgcaggatgccgacatcctgatccgcgaaggccgccaccccgtg
gtggaggccatgcagggcagcgccaacttcatccccaacgacctgcgcatggacgaggcc
cggcggctgctgctgatcaccggccccaacatggcgggcaaatccaccgtgctgcgccag
acggccatcatctgcctgctggcccagatgggctcgttcgtgcccgcgcgcgaggcgcgc
ctgggcatcgcagaccgggtattctctcgggtgggcgcatcggacaacctggcgcagggg
cagtccaccttcatggtggaaatgatggaaaccgcgcgcatcctgcgccaggcgggcaag
cgcagcctagtcatcctggacgagataggacgcggcaccagcaccttcgacggcctggcc
ctggcctgggccgtggtggaagagctggcccgccgcgcgggcggcaccatccgcaccctg
ttcgccacccactaccacgagctgaccgcgctggaagggcgcatccccggcgtgcacaac
atgaacatcgccatccgcgaatggggcggcgaaatcgtgttcctgcgccgcctggtaccc
ggcccgtccgaccgcagctacggcatcgaggtggcccggcttgccggggtgccgcagccg
gtggtacagcgcgcacgggaactgctgcacgaactggaaaaagcccgtgacggcaggggt
gaagccccccgcaccgcgcgcgccgtgctgccggggctggacatgcccgaaccgaagcag
gccgccaagccgcgcgccctgcttgccgcgcgggcggaaccggtggcccatccgctgctg
accaccctgcgcgacctggataccgaccaccttacgcccatgggggcgctgcaactgctc
aacgaatggaaactgctctggggaggcccagcccatgccgaagataccgttcccgaccag
cccccggcagcgccgggagacgaccgtgactga
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