Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0477
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Entry
DvMF_0477 CDS
T00816
Name
(GenBank) putative RNA polymerase, sigma 70 family subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvm03021
]
DvMF_0477
Transcription machinery [BR:
dvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DvMF_0477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
CFAP58_CC
Motif
Other DBs
NCBI-ProteinID:
ACL07434
UniProt:
B8DKK5
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All DBs
Position
560337..561761
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AA seq
474 aa
AA seq
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MTDTVKTPRRAARTRGAKAAQSAQSVGHAGATGALSSAPGYSEAPEAPVTPEVVLEAEVL
LDQQPEVATRARAKAGSGKSSSGKATAGKAARGRKAASAPAGDGDEDAPASAPLAGEAPD
EADDDESADDELDIDFDGPGDDAIDVDLLHGDDDSPPARHDAHDGADASDESAGRHRSLP
VLRPAMPGASTRDSLHLYLREISRFPLLKPDEEFDLARRVQEQGDSDAAFRLVTSHLRLV
VKIAMDFQRRWMQNVLDLIQEGNVGLMRAVNKFDPEKGIKFSYYAAFWIKAYILKFIMDN
WRMVKIGTTQAQRKLFYNLNKERQRLIAQGYDPDATILSEKLNVTVEQVIEMEQRLDSSD
MSLDITVGEDSGGATRMDFLPALGPGIEETLANSEIARMVQDRVQTILPKLSDKEAYILQ
HRLLSEQPVTLREIGEKYDITRERVRQIEARLLQKLRDHLFKEIRDFSSDWISQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacagtgaaaacgccgcgccgcgccgcgcgcacgcgcggtgccaaggccgcc
caatccgcccaatccgtcggacacgcaggggcgaccggcgccctctcctctgccccagga
tattccgaagcacccgaagcgcccgtcacgccggaagtcgtgcttgaggccgaggtgctt
ctggatcagcagccggaagttgccaccagggcccgcgccaaggcgggctccggcaaatcc
tcttccggcaaggccactgcgggcaaggccgcgcggggccgcaaagccgcctccgccccc
gctggcgacggcgacgaggacgcacccgcctccgcccccctggccggcgaagcccccgac
gaagcggacgacgatgaaagtgccgacgacgaactggacatcgacttcgacggccccggt
gacgacgccatcgacgtcgacctgctgcacggcgacgacgattcgccgcctgcccggcat
gacgcacatgacggggcggacgcatctgacgagagcgcaggccgccaccgttccctgccc
gtactgcgcccggccatgcccggcgcctccacgcgcgactcgctgcacctgtacctgcgt
gaaatcagccggtttccgctgctgaagccggacgaggaattcgaccttgcccggcgcgtg
caggaacagggcgacagcgatgccgccttccggctggtcacctcgcacctgcgcctggtg
gtcaagatcgccatggacttccagcggcgctggatgcagaatgtgctggatctgattcag
gaaggcaacgtgggcctgatgcgcgcggtcaacaaattcgacccggaaaagggcatcaag
ttctcgtactacgccgccttctggatcaaggcctacatcctcaagttcatcatggacaac
tggaggatggtcaagatcggcaccacgcaggcccagcgcaagctgttctacaatctcaac
aaggaacgccagcgccttatcgcgcaggggtatgaccccgacgccaccatcctgtcggaa
aagctcaacgtgaccgtcgagcaggtcatagagatggagcagcggcttgattcgtccgac
atgtcgctggacatcaccgtgggcgaggattccggcggggctacccgcatggacttcctg
cccgccctgggccccggcatagaggaaacgctggccaacagcgaaatcgcgcgcatggtg
caggacagggtgcagaccatcctgccgaagctgtcggacaaggaggcgtacatcctccag
caccgcctgctttcggaacagccggtcaccctgcgcgagatcggcgagaagtacgacatc
acccgggaacgcgtccgccagatagaagcgcgcctgctgcaaaagctgcgcgaccatctg
ttcaaggaaatccgcgacttctcctcggactggatatcacagtag
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