Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0561
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Entry
DvMF_0561 CDS
T00816
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00300
Lysine biosynthesis
dvm00470
D-Amino acid metabolism
dvm01100
Metabolic pathways
dvm01110
Biosynthesis of secondary metabolites
dvm01120
Microbial metabolism in diverse environments
dvm01230
Biosynthesis of amino acids
Module
dvm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DvMF_0561
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DvMF_0561
Enzymes [BR:
dvm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DvMF_0561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACL07518
UniProt:
B8DKT9
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All DBs
Position
660511..661359
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AA seq
282 aa
AA seq
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MSGKARTVPIHKLHGCGNDFVFIDNRALGLPVAAMPDWARSVCRRAFGVGADGLVFLDET
PKDREGDYIWHFYNADGSRAEMCGNASRCAALLAVELGFAGPKHVFGTDAGLIRAEADVA
AGMAKVELTPPRDLTLGIELDLGEGRDMVHFVNTGVPHAVVFKRDASTVDVRTLGAALRR
HAHFAPAGTNANFAQVIDRRNIHLRTFERGVEDETYACGTGAAAGAFIAHALGLAESTVN
VRSSGGEILGISIEGGSVFLSGKAVRVFSGEMFLEGLGLALA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaaggcacgcaccgtacccatccacaagctgcatgggtgcggtaacgacttc
gtattcatcgacaaccgggcactgggcctgcccgtcgcggccatgcccgactgggcccgc
tccgtgtgccgccgcgctttcggcgtgggcgccgacggcctcgtctttctggatgaaacg
ccgaaagaccgcgaaggcgactacatctggcacttctacaatgccgacggctcgcgcgcc
gaaatgtgcggcaacgcttcgcgctgcgccgcgctgctggccgtggaactgggctttgcc
gggccgaagcacgtcttcggcaccgatgccgggctcatccgcgccgaggccgacgtggcc
gccggaatggccaaggtggaactgaccccgccgcgcgacctgaccctgggcatcgaactg
gaccttggcgaaggccgcgacatggtgcacttcgtgaacaccggggtaccccatgccgtg
gtgttcaaacgcgacgcctcgaccgtggacgtgcgcacactgggcgcggcgctgcgccgc
cacgcgcacttcgcgcctgcgggcaccaacgccaacttcgcgcaggtcatcgaccgcagg
aacatccacctgcgaaccttcgaacgcggcgtggaggacgaaacctacgcttgcggcaca
ggggcggcggcgggcgcgttcatcgcgcatgcgctggggcttgctgaatccacggtgaat
gtcaggagctccggcggcgagatccttggcatatccattgaaggcggctcggtgttcctt
tccggcaaggccgtgcgcgtcttctctggcgagatgttcctggaagggctggggctggcc
ctggcgtaa
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