Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0979
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Entry
DvMF_0979 CDS
T00816
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DvMF_0979
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dvm01007
]
DvMF_0979
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvm03016
]
DvMF_0979
Enzymes [BR:
dvm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DvMF_0979
Amino acid related enzymes [BR:
dvm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DvMF_0979
Transfer RNA biogenesis [BR:
dvm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DvMF_0979
Prokaryotic type
DvMF_0979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
ACL07934
UniProt:
B8DPM7
LinkDB
All DBs
Position
complement(1186730..1189147)
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AA seq
805 aa
AA seq
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MLLSLAWLREFVPFEGTAEQLGDRLTMLGLELEEIRRPFDAIRAIVVGHVVERAKHPEAD
KLSVCKVDAGQGELLDIVCGAPNVAAGQKVPVALVGTTMPGGLVIKKAKLRGQPSHGMIC
SERELGLSDDHEGIMVLPEHFTVGRLLVDELQLDMEVCDISITPNRADCLSVLGLAREVA
LGFGLPLTLPRLNLVEDGPDCSGEVAIEIADPALCHAYHGRILENIRVGKSPARIRHRLT
AIGVRPISNIVDATNYVMMELGQPMHAFDLDLLEGARIVVSPAVAGERIVTLDGQDRALV
AGDLLIRDAVKPVALAGVMGGANSEVSDATTRVLLESAVFRPGTVRRTGRRLGLSSEASY
RFERGVDQAGAVYAMHRAAQMMAELSGARLRPGMCSAEPRPWTSPALRFRPARARMLLGM
GEDTIGDAFCADTLTGLGCVLDRTQGSDAADWKVSAPSHRLDFEREADLIEEVGRVYGLD
AIPPVLPKVMRPLDQAGAPESEYDFWKRIKGWGRGLGLNEAINYSFVGQKDLDHLGLPAE
GRIPIMNPLSEDQNVLRTALAPGLLNNLRHNIAQGNAGLRLFELARIFTADATAETTACE
RGRLGILMYGARHDSAWPNPEADADYQDLKGVVEHFAAFLHLPQPHCAMAEAPHPFLAPC
VTVTVQGRVLGVMGRVRPDLADAYHARKDVWLADLDLDAARQLHDAVTVRFAALPVYPPV
RRDITVMAPAALQAGAVLDHVRGMKLPLLEGVELIDVFAPEDREERNLTFRMTFRHAGRT
LKDAEVDKEREKVASSLQQVLPVRL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtcccttgcctggctgcgcgaattcgttcccttcgaaggcaccgccgaacag
ctcggcgaccgtctgaccatgctcggccttgaactggaggaaatccgccgcccgttcgac
gccatccgcgccatcgtggtgggccacgtggtggagcgcgccaagcacccggaggccgac
aagctgtcggtgtgcaaggtggacgcgggccagggcgagttgctggacatcgtgtgcggc
gcgcccaacgtggccgccggccagaaggtgcctgtggccctggtgggcaccaccatgccc
ggcggtctggtcatcaagaaggccaagctgcgcggccagccctcgcacggcatgatctgc
tccgagcgcgaactgggcctcagcgacgaccacgaaggcatcatggtcctgccggagcac
ttcacggtgggcaggctgctggtggacgagctgcaactggacatggaggtgtgcgacatc
tccatcacgcccaaccgcgccgactgcctttctgtgctgggccttgcgcgcgaggtggcc
ctgggcttcggcctgccgctgaccctgccccggctgaaccttgtggaggacggcccggac
tgctccggcgaggtggccatagagatcgcagacccggccctgtgccatgcctaccacggg
cgcattctcgaaaacatccgcgtgggcaagagcccggcgcgcatccgccatcgcctcacc
gccatcggcgtgcgccccatttccaacatcgtggacgccaccaactacgtgatgatggaa
ctgggccagcccatgcatgcctttgacctggatctgctggaaggggcgcgcatcgtggtc
tctccggctgtggcgggcgaacgcatcgtgacccttgacggccaggaccgcgcgctggtg
gcgggcgacctgctgatccgcgacgcggtgaagcccgtggcccttgcgggcgtcatgggc
ggcgccaactccgaagtttccgacgccaccacccgcgtgctgctggaaagcgccgtgttc
cgccccggcaccgtgcgccgcacgggccgcaggctgggcctttccagcgaggcgtcgtac
cgcttcgagcgcggcgttgatcaggccggtgccgtgtacgccatgcatcgcgcggcccag
atgatggccgaactttccggcgcgcggctgcgccccggcatgtgcagcgccgaaccgcgc
ccctggaccagccccgcgctgcgcttccgcccggcgcgcgcccgcatgctgctgggcatg
ggcgaggacaccattggcgacgctttctgcgccgacaccctgaccggcctcggctgcgtg
ctggaccgtacccaagggtccgacgccgccgactggaaggtttccgcccccagccatcga
ctggacttcgaacgcgaggccgacctgatcgaggaagtgggccgcgtgtacgggctggac
gccattccgccggtgctgcccaaggtcatgcgtccgttggaccaggcgggcgcgcccgag
tccgagtacgatttctggaagcgcatcaagggctggggccgcggccttggcctgaacgag
gccatcaactacagcttcgtgggccagaaggatctggatcacctgggcctgcccgccgaa
ggccgcatcccgatcatgaacccgctgtccgaagaccagaacgtgctgcgcacggcgctg
gccccgggccttctgaacaacctgcgccacaacatcgcgcagggcaacgccgggctgcgg
ctgttcgaactggcgcgcattttcacggcggacgcaacggcggaaaccaccgcctgcgag
cgggggcgtctgggcatcctgatgtacggcgcgcgccacgacagcgcctggcccaacccg
gaagccgacgccgactatcaggacctgaagggcgtggtggagcacttcgcggcgttcctg
cacctgccgcagccgcactgcgccatggccgaagcgccgcaccccttcctggccccgtgt
gtcaccgtgacggtgcagggcagggtgctgggcgtcatggggcgggtaaggcccgacctt
gccgacgcctaccatgcccgcaaggacgtgtggctggccgacctcgacctggatgcggcg
cgccagctgcacgacgcggtgacggtgcgctttgccgcgctgccggtgtacccgccggtg
cgccgcgacatcacggtgatggcccccgccgccctgcaggccggcgcggtgctggaccac
gtgcgcgggatgaagttgccgttgcttgaaggtgtcgaactcattgatgtctttgctccg
gaagaccgcgaagagcgcaacctgaccttccgcatgaccttccgccatgccgggcgcacc
ctgaaggacgccgaagtggacaaggaacgcgagaaagtggcaagttcgctccagcaggta
ctccccgtacggttgtaa
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