Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1019
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Entry
DvMF_1019 CDS
T00816
Name
(GenBank) peptidase dimerisation domain protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00300
Lysine biosynthesis
dvm01100
Metabolic pathways
dvm01120
Microbial metabolism in diverse environments
dvm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DvMF_1019
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dvm01002
]
DvMF_1019
Enzymes [BR:
dvm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DvMF_1019
Peptidases and inhibitors [BR:
dvm01002
]
Metallo peptidases
Family M20
DvMF_1019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
DNA_Packaging_2
Motif
Other DBs
NCBI-ProteinID:
ACL07974
UniProt:
B8DPR7
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All DBs
Position
1235111..1236346
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AA seq
411 aa
AA seq
DB search
MSQSTDTFARFAEQARACLPSGLDEATASDIADMVALTARLMAIRSTASRPEELARCADV
IAAWLADNNIPCTRMEHEGVPSLTAGNPAHAAPLALLVHFDVVDGADVMFAPRLDLTEGV
LHGRGSIDDKYAVALALVLCRRCLRELAARGLGPDALPLVLVITGDEETGGRNGAFRVLP
HIRADFCVALDGGSPGSVITKEKGVIDLVLTARGKSAHGARPWLGENAVDALVRDYEALK
PLFPGLYPERAGLAAPDAPPPSAVLPQAEAHWHRTLNLGLLHAGTAVNQVPGEAVAHLDV
RYTEHDNPHQLVAAMRAAVRGELAVTRMEPLFVTGDTPWLDRLLRHAPGAATGCAHGASD
ARFLTDLSMAGVVWGAEGETSQHTDHEHLLIPSLVPVYQALLALARDAANG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatccacagacaccttcgcccgattcgcggagcaggcccgcgcctgcctgccc
tccgggctggacgaggctaccgcctcggacatcgccgacatggtggcgctgaccgcccgg
ctcatggccatccgctccacggcctcgcgcccggaagaactggcccgctgcgccgacgtc
atcgccgcctggctggccgacaacaacattccctgcacccgcatggagcacgagggcgtg
ccatcccttacggcgggcaacccggcccacgccgcgccgctggccttgctggtgcacttc
gacgtggtggacggcgcggacgtcatgttcgcaccgcgcctggacctgacggagggcgtg
ctgcacgggcgcggcagcatcgacgacaagtacgccgtggcgctggccctggtgctgtgc
cgccgctgcctgcgcgagcttgcggcacggggccttggcccggatgccctgcccctggtg
ctggtgatcaccggcgacgaggaaaccggcggtcgcaatggcgccttccgcgtgctgccg
cacatccgcgccgacttctgcgtggcgctggacggcggttcgccgggctcggtcatcaca
aaggaaaaaggggtcatcgacctggtgctcacggcgcggggcaaaagcgcccacggcgcc
cggccctggctgggcgaaaacgccgtggatgcgctggtgcgcgactacgaggccctgaag
cccctctttcccggcctgtatccggaacgggcggggctggcagcgcctgatgcgccgccc
ccctccgccgtgttgccgcaggcggaggcccactggcaccgcaccctcaacctgggcctg
ctgcacgcgggcacggcggtgaaccaggtacccggcgaagccgtggcccatctggacgtg
cgctacacggagcacgacaacccccaccaactggtggccgccatgcgtgccgccgtgcga
ggcgaactggccgtcacccgcatggagccgctgttcgtcaccggcgacaccccgtggctg
gacaggctgttgcgccacgcccccggcgcggccaccggctgcgcccacggggccagcgat
gcccggttcctgaccgatctttccatggccggggtggtctggggcgcggaaggcgaaacc
agtcagcacaccgaccacgaacacctgctgatccccagcctggtgccggtgtaccaggcc
ctgctggccctggcgcgcgatgcggccaacggatag
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