Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1161
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Entry
DvMF_1161 CDS
T00816
Name
(GenBank) Hemolysin-type calcium-binding region
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
HemolysinCabind
Big_9
Cadherin_5
Cadherin_4
BapA_N
Motif
Other DBs
NCBI-ProteinID:
ACL08115
UniProt:
B8DKF3
LinkDB
All DBs
Position
1429589..1437202
Genome browser
AA seq
2537 aa
AA seq
DB search
MTRSPQGAAGRGAAPATDPVTLLLPAAGQELHFDANADSRFALGFPTDAAALERNGDDLV
FSFPDGGRIVLSGFFEGNNADLLPEFSLPEGGTVSGYDFLAALEPDLLPAAGPGAGAGAA
GGGVGDYSDDPGSLIASIDRLDPLTPFFWNSAVEPTLEAEGPLDTASGTLTFTLLPVNPD
GSLASTLGGYEDNRPNQHLDPTGGNEQPLQLTVVFTPADNEVLTELSLTGFHEGTTISIG
DPSFGPGSFVVTWPGQIVTLTPAQIAAGVFVRPPEDSSADMNLSATAAITDPDSGLSSVI
SGTFTLVIDAVADKPALEATAQSAPAAEETPVTVHAAATFTDLDGSERHFIEVRDIPTDW
VLTGALPQGWVIVDPVTHQPIATPVHDLGENTTYTLVIEVTDATTAGYGGVNSGDSASIG
ADLTFNPRDWSDERWGDATPRDGEGGTTLTVAAVAQETVTDGELTTGNNISETTETVVVS
RTEDHPDITPEGSTGHALTLVADETAGVQLHGGKGDVDPSTPSGLSASVNAVLAGLGLSA
ADALSATRGSVTFNLHSDGSGEAAGNQASPSAVSIAWDAAQAVPEGTVLRTTSGADISLV
VDENDPHVLRGVFTEGGVQHTAFVVVIADANLSGAGSATVTFVQYTPLAHGNTGNHDEGL
DLPTFSFTVSDDEGDTASATVQVTVRDDGPTANADNNTFDEATVTAIDGNVLTGESSHGT
DSTPDASGTDGWAGTDGGTGSGAVTGFSVVVGSTTYSGLALDTPVTILNPGTSVPAGTFT
LHADGSYTFTRAPGQDIADSFTMKVNYTVKDGDGDTASSTLTLKLNAAPTLQLSLTGDSQ
VYEDAAHGARVNPAGSTGGADGWNASGDNSHDIATYTVNWSYAGGRATGGTFAAGSFAFD
VTLKDGSAKFDADTTNNTTMANTGDVTWAVPNGSGGWTAMTFNLTTADGRAALVAALNAD
LAERYGSNAEGESYVRVSGVSADGKTLTFTVLDGCPLDNALPVRVAAIDDRLGDNNENYS
VQIGNIHPAEDTPSSMDVVIAGQRSQTTTVYDEGNAAEGDGFRVGLESPVPAQESDGTAQ
LTVVLYEKDGDLYTLNEGPAQNITVSLKFGATGDTAGADQDYFTTTSYTLKPTDWTWNAT
EGRWEAKVPVTLADDRLSEGSESFTVKLTGVSGHEAGLNDAKTTATVTITDDTAAGHEAK
LDGPSLEYFGPETVVREPVAPGESAEFTGGVNTTGTVNTAGYTIILTEVAAQDVVVWLKL
GSAGLGTDFRTGTGLHAASDVSGLPGYADRPEGADFYVIVKAGAASARFTVDILHDHDTA
ADGHGVDAGTDTVSWTIVDMQGSEVRFTPGDSGSTSTETIADDMRGPVVSITELDATQNT
ADGTTTIKVGLGNDADGHATANEDVTVTLQVVGSDGSVHEYTVTIPAGQDTGSLTLPIPH
TDYYHVRVVGTDGGETRHDDGFRFVDVTGPGGGGGTDHGRVTLGLAAHDLPEGASHDGVN
QAVYTVTGSLSDNYRPLLNGDVSFTLKTFDNSAHSPADYTASNVTVTVDSGLMVLAKMSA
TDSFSVDVLEDGTAVFTIPDLQFLGGTHAVSISFAPDGTAAIFVDGTAADGLIATLIEDH
LLHGAVTVTGPTPIVSVVDDHRVEGDETYSVVLSNLSGNATVAGDGHGAMDSVTIIDNDA
PTVLVTISDHTGAQTDTATEGQAHPLTVSVSLVDADGHPLALGDGPVTFQLTFSGTAEQG
KDFAPYTTLVTIPDGGSAASVQVSLPDDYISDGNRTFVVTATPVANDPYNGYPAGFIGSG
SSAEVTIIDHVNGPDVTLTASTTSISENNGSASFGISMDKAVEEDATFTVRVDFGPGMTE
ADLAGVKIGSGSVSTAGITKVLGADNVTVTGWEFQVTVPKGSAGGGAFSVVTRNDYETEG
KETFTVSLVDSHGGEIGSLGAAHTVTVNDTLDGPQVYLDTKGGYGTAEEGGSAELHIGMT
KTAVADFSVDLTVQTPELLVPGSTATLWIKTASGDWQAVDTAVAIGTDGSLRVTVPAGTV
DAKVQFDLAGNDMVGDKHTFTVTLDGVADGESAVRSVGSLTATFAEESHNAITYQFAGSA
PDSNAVVTYTLKGVAFANVVSVTVDGQPVTITKVGSQATFTVTGAAGAAISDRITVTFKD
ANAAADKAALTIGSSVRLSADIAVTDTTPGLMAAATLIALTGDEAALATGVLHTSDLLAG
VEDPSPHGAGIGFGANASAADGMGHTGSGWTVDTASGELHYSLTGDGHYTYTAHDLGDAA
DKVTATLTTHVQTGTVFDGSDDAHGIGLIVAGSAHGDTITGSSGDDRIHGGAGNDHLYGG
SGNDVLHGGDGNDVLHGGDGNDYLDGGAGVNTLYGDAGDDTLVVHDTGGGTGVADGYLDN
HDFAGLHGGDGYDTLLVQGEDVTLDFSRIAADTVTGIEAIDLTAHGAQHVTLSLDDLTSS
DTGSLAVVFGETPVLSASTAASSEHAADGSVTFTAARGDSVTLTGLTSIQIASIGDLTDT
HDHQLLIHQVVSSTSGG
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttccccgcagggtgccgccgggcgcggcgccgcccccgccaccgaccccgtc
acgttgctcctgcccgccgccgggcaggagctccacttcgacgccaacgccgattcccgc
ttcgccctgggctttcccaccgacgccgccgccctggaacgcaacggcgacgacctggtg
ttcagctttcccgacggcggccgcatcgtgctttccgggtttttcgaaggcaacaacgcc
gacctgctgccggaattcagccttcccgaaggcggcaccgtttccggctacgattttctg
gccgcgctggagcccgacctcctgcccgccgcgggccccggcgcgggcgcgggcgctgcc
ggtggcggcgtgggcgactacagcgacgaccctggcagcctcatcgcgagtattgaccga
ctggatccgctgacgccgttcttctggaacagcgccgtggaacccaccctggaagccgaa
ggcccgctggacaccgcgtccggaacgctgaccttcacgctgctgccggtaaatcccgac
ggcagcctggccagcacactgggcggctacgaggacaacaggcccaaccagcacctggac
cccaccggcggcaacgagcagccgttgcaactcaccgtggtgttcaccccggcagacaac
gaggtgctgaccgaactcagcctcaccggcttccatgaaggcaccaccatcagcatcggc
gacccgtccttcggccccggcagcttcgtggtgacctggcccggtcagatcgtcacgctg
accccggcgcaaatcgcggcgggcgtcttcgtgcggccgccggaagacagctccgccgac
atgaacctgtcggccaccgccgccatcaccgacccggattccggcctgagcagcgttatt
tccggcaccttcaccctggtcatcgacgcagtggccgacaagcccgcactggaagccacg
gcgcaatctgccccggctgccgaggaaacgcccgtcacggtgcacgcggcggccaccttc
accgaccttgacggctcggaacgccacttcatcgaagtgcgcgacatccccaccgactgg
gtacttaccggtgcgctgccgcagggttgggtaatcgtggacccggtcacccatcagccc
attgccacgccggtgcacgacctgggcgaaaacaccacctacaccctggtcatcgaggta
acggacgccaccaccgccggttacggcggcgtcaattccggcgacagcgccagcattggc
gccgacctcaccttcaacccgcgcgactggtccgacgagcgctggggcgacgccaccccg
cgcgacggcgagggcggaaccaccctgaccgtggccgccgtggcgcaggaaaccgtgacc
gacggcgaactgaccaccggcaacaacatttccgagaccacggaaaccgtcgtggtctcc
cgcacggaggaccatccggacatcacgccggaaggctccaccggccatgccctgaccctg
gtggcggacgagaccgccggggtgcagttgcatggcggcaagggtgacgtggatccgtcc
accccgtccgggctgtccgcctcggtcaatgcggtgctggcgggccttggcctgtccgcc
gccgatgccctgtcggccacgcggggcagcgtgaccttcaacctgcattccgacggcagc
ggtgaagcggcgggcaaccaggcctcgccttccgccgtgtccatcgcctgggacgccgcg
caggccgtgccggaaggcaccgtgctgcgcaccacctcgggcgcggacatttcgctggtt
gtggatgaaaacgacccgcacgtgctgcgcggcgtgttcaccgagggcggcgtacagcac
accgccttcgtggtggtcattgccgatgccaacctttccggcgcgggttcggccacagtc
accttcgtgcagtataccccgctggcccacggcaacaccggcaaccacgacgaggggctg
gatctgccgacattctcgttcaccgtcagcgacgacgagggcgacaccgcctcggccact
gtgcaggtgacggtgcgcgacgacggccccacggccaacgcggacaataacaccttcgac
gaggccacggtgaccgccatcgacggcaacgtgctgaccggtgaaagctcgcacggcacg
gacagcacgcccgacgcatccggcacggacggctgggctggcaccgacggggggacgggc
agcggcgccgtgacgggcttctcggtggtggtgggttccaccacctacagcggccttgcg
ctggacaccccggtgaccatcctcaaccccggcacctccgtccctgcgggcaccttcacc
ctgcatgccgacggcagctacacctttacccgtgcgccgggccaggacattgcagattcc
ttcaccatgaaggtcaactacacggtcaaggacggcgacggcgacacagcctcgtccacc
ctgaccctgaagctgaacgccgcgcccaccctgcaactttcgctgaccggcgattcgcag
gtgtacgaagatgcggcccacggtgcccgcgtgaacccggcgggctccacgggcggcgcg
gacggctggaacgccagcggcgacaacagccacgacatcgccacctacacggtcaactgg
tcatacgcgggcgggcgggccaccggcggcacctttgccgcgggttcctttgccttcgac
gtgacgctgaaggacggctccgccaagttcgacgccgacaccaccaacaataccaccatg
gccaacacgggcgacgtgacctgggccgtgcccaacggcagcggcgggtggacggccatg
accttcaacctcaccaccgccgacgggcgcgccgcgctggttgccgcccttaacgcagac
ctggccgaacgctacggcagcaacgccgaaggcgaaagctacgtgcgggtcagcggcgtt
tccgccgacggcaagaccctgaccttcaccgtactggacggctgcccgctggacaacgca
ctgcccgtgcgggtggccgccatcgacgacaggctgggcgacaacaacgaaaactactcg
gtgcagatcggcaacatccacccggcggaagacaccccgtccagcatggacgtggtcatc
gccgggcagcgcagccagaccaccaccgtgtacgacgaaggcaacgcagccgaaggcgac
ggctttcgcgtggggctggaaagcccggtgcccgcgcaggaaagcgacggcacggcccag
ctcaccgtggtgctctacgagaaggacggcgacctgtacacgctgaacgaaggccccgcg
cagaacatcaccgtatcgctcaagttcggcgccacgggcgacaccgcaggagccgaccag
gactacttcaccaccacctcgtacaccctgaagcccaccgactggacctggaacgccacg
gaaggccgctgggaagccaaggtgccggtaacgctggccgacgaccgactgagcgagggc
agcgaaagctttaccgtgaagcttaccggcgtgtccgggcacgaggccgggctgaacgac
gccaagaccaccgccacggtgaccattaccgacgacaccgccgccgggcacgaagcgaag
ctggacggcccgtcgctggaatacttcggcccggaaaccgtggtgcgcgaacccgtggcc
cccggcgaatccgccgagttcacgggtggcgtcaacaccaccggcacggtgaacaccgcg
ggctacaccatcatccttacggaagttgccgcgcaggatgtggtggtatggctgaagctg
gggtccgcgggcctcggcaccgacttccgcaccggcaccggcctgcacgcggcatctgac
gtttccggcctgcccggctacgccgaccgccccgaaggggccgacttctacgtcatcgtc
aaggcgggcgcggcatcggcccggttcaccgtggacatcctgcacgaccacgacaccgcc
gcagacggccatggcgtggatgcgggcacggacaccgtgtcgtggaccatcgtggacatg
cagggcagcgaagtacgcttcacccccggcgattccggctccaccagcacggaaaccatc
gccgacgacatgcgcggcccggtggtgtccatcaccgaactggacgccacccagaacacc
gccgacggcaccaccaccatcaaggtgggcctgggcaatgacgccgacggccacgccacg
gccaacgaggacgtcaccgtcacccttcaggtggttggcagcgacggcagcgtgcacgaa
tacaccgtgaccattcccgccgggcaggacacgggcagccttaccctgcccatcccgcac
accgactattaccacgtgcgcgtggtgggcacggatggtggcgaaacccgccatgacgac
gggttccgcttcgtggacgtcaccgggccaggcggtggcggcggcaccgaccatggccgg
gtcaccctgggccttgccgcgcacgacctgccggaaggcgccagccacgacggggtgaac
caggcggtgtacaccgtcaccggcagcctgtcggacaattatcgccccctgctgaacggc
gacgtcagctttaccctgaagaccttcgacaacagcgcgcacagcccggccgactacacg
gcgagcaacgtgaccgtgaccgtggattccggcctgatggtgctggccaagatgtccgcc
accgacagcttctcggtggatgtcctggaggacggcacggcggtgttcaccatccccgac
ctgcaattcctgggggggacgcatgcggtgtccatcagcttcgcaccagacggcacggcg
gccatcttcgtggatggcacggccgccgacgggctcatcgccaccctgatcgaagaccac
ctgctgcacggcgccgtgaccgtaaccggcccgacgcccatcgtgagcgtggtggacgac
caccgcgtggaaggcgacgagacctattccgtggtgctgtccaacctcagcggcaacgcc
accgtggccggtgacgggcacggcgccatggacagcgtgaccatcatcgacaacgacgcg
cccacggtgctggtaaccatcagcgatcataccggcgcgcagacggacaccgccaccgaa
ggccaggcccacccgctgacggtcagcgtcagcctggtggacgcggatggccaccccctg
gccctgggcgacggcccggtgaccttccagcttaccttctccggcacggcggaacagggc
aaggacttcgcgccttacaccaccctggtcaccattccggacggcgggtccgccgcctcg
gtgcaggtcagcctgccggatgattacatcagcgacggcaatcgcacgttcgtcgtgaca
gccacccccgtagccaacgacccgtacaacggctatcccgccgggttcatcggcagcggc
agcagcgcggaagtgaccatcatcgaccacgtcaacgggccggacgtcacgctgacggca
tccaccaccagcatctcggaaaacaacggttccgccagctttggcatatccatggacaag
gccgtggaagaagacgccaccttcaccgtgcgcgtggactttggccccggcatgacagag
gcggatctggccggggtgaagataggcagcggcagcgtgtccaccgccggaatcaccaag
gttctcggtgcggacaacgtcaccgtgacgggctgggaattccaggtcaccgtgcccaag
ggcagcgcggggggcggcgccttcagcgtggtgaccaggaacgactacgagaccgagggc
aaggaaaccttcaccgtgtcgctggtggacagccacgggggcgaaatcggcagccttggc
gcggcccataccgtcaccgtcaacgacaccctggacggtccgcaggtgtatctggacacc
aagggcggatacggtacggcggaagaaggcggcagcgcggaactgcacatcggcatgacc
aagaccgccgtggccgacttcagcgtggaccttaccgtgcaaacgccggaattgctggtg
cccggctccaccgccacgctgtggatcaagaccgccagcggcgactggcaggccgtggac
acagccgttgccatcggcacggacggctcgctgcgggtcaccgtgcccgccgggaccgtg
gacgccaaggtgcagttcgaccttgcaggcaacgacatggtgggtgacaagcacaccttc
accgttaccctggacggcgtggcagacggcgaaagcgcggtgcgttcggtggggtcgctc
actgccacctttgccgaggaaagccacaacgccattacctaccagtttgcgggttccgcg
ccggacagcaacgcggtggtcacctacaccctgaaaggcgtggccttcgccaacgtggta
tcggtgaccgtggatggacagccggtgaccatcaccaaggtgggcagccaggcaaccttc
acggtgactggcgcggcgggcgcggccatatcggaccgcatcaccgtcaccttcaaggat
gccaacgccgccgccgacaaggccgccctgaccattggcagcagcgtgcgcctgagcgcg
gacatcgcggtgacggataccacccccggcctgatggcggcggccacgcttatcgcgctt
accggcgacgaggccgccctggccacgggcgtgctccacaccagcgacctgctggcgggc
gtggaagaccccagcccccatggggcaggcatcggcttcggggccaacgcctcggcagct
gacggcatgggtcacaccgggtccggctggacggtggacaccgccagcggcgagctgcac
tacagcctcaccggtgacggtcactatacgtacaccgcgcacgacctgggcgatgcggcg
gacaaggtcaccgccaccctgaccacccacgtgcagaccggcaccgtattcgacggttcc
gacgatgcgcacggcatcggcctcatcgtggccgggtccgcccatggcgacaccatcacc
ggttccagcggcgacgatcgcatccacggcggcgcgggcaacgaccacctgtacggcggg
tccggaaacgacgtgctgcacggcggtgatggtaatgacgtgctgcacggcggtgacggc
aacgactaccttgatggtggcgcgggggtgaacaccctgtacggcgatgcgggcgacgac
accctggtggtgcacgacaccggcggcggcacgggcgtggcggacggttacctcgacaat
cacgacttcgccgggctgcacggcggtgacggctacgacacactgctggtgcagggcgag
gacgtgaccctggacttcagccgcatcgcggcggacacggtgacaggcatcgaggccata
gaccttaccgcccacggcgcgcagcacgtcaccctcagcctggacgacctgacctccagc
gacaccggttcactggcggtggtgttcggcgagaccccggtgctttccgccagcacggcg
gccagttcggaacacgcagccgacggctcggtcaccttcacggcggcgaggggcgattcg
gtgacccttaccggccttacctccatccagatcgccagcatcggcgacctgaccgatacc
catgaccaccagttgctcatccaccaggtggtcagctccacctcgggcgggtag
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