Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1427
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Entry
DvMF_1427 CDS
T00816
Name
(GenBank) metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DvMF_1427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvm03019
]
DvMF_1427
Enzymes [BR:
dvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DvMF_1427
Messenger RNA biogenesis [BR:
dvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DvMF_1427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_NucTran2_2
MerR
CNV-Replicase_N
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ACL08375
UniProt:
B8DRT8
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All DBs
Position
1746161..1747486
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AA seq
441 aa
AA seq
DB search
MSQPFKDAIAICKAILRNGYDAYVVNAQLQKELLDGREIEIDIACEPDYEELGKLFPSLE
RSNEDGVVATMREGGALIRFYHTDTEESSHPEHTLARITPRMLRVLEEQGKMPPALACPY
IAHTGDVYEGFEDFSKGKVQLRGIPDETLRRNYLLVIRAMRFAANFDLPIEPNSWIAIIR
AASRVLDYVRISDIMDEWRKVEAECMWKFVRLLFDSQVLHGLLPEVAALSRVRQQRNDEG
TEESVLDHTLDCMHHYPEGEYNYDWLGTFAMLFHDVGKLYTAEYFDGKWNFYQHHRVGAK
VTRKLLRRLHFSPEDVEQVCHLVRHHMRFHFMLTDRGIRRFKSLDEYPRLIEMARADLEA
RGGSYTYFNHNMKYLERAETPEQMLEPLLNGNEIMEFTNLHPGPQVGMLRDALLKAQVAG
EVTSVPEAVDYVREYKAKNFG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacctttcaaggacgccatagccatctgcaaggccatccttcgcaacggctac
gacgcctacgtggtcaacgcgcagttgcagaaagaactgctggacggccgcgaaatcgaa
atcgacatcgcctgcgagcccgactacgaagagctcggcaagcttttccccagcctcgaa
cgctccaacgaagacggcgtggtcgccaccatgcgtgaaggcggggcgctgatccgcttc
taccacaccgacaccgaagaatcctcgcacccggaacataccctggcccgcatcaccccg
cgcatgctgcgcgtgctggaagagcagggcaagatgccccccgcactggcctgcccgtac
atcgcccataccggcgacgtgtacgaaggcttcgaggatttctcgaagggcaaggtgcaa
ctgcgcggcattcccgacgaaaccctgcgccgcaactacctgctggtcatccgggccatg
cgtttcgcggccaacttcgacctgcccatagagcccaactcgtggatagccatcatccgc
gccgccagccgcgtgctggactacgtgcgcatctcggacatcatggacgagtggcgcaag
gtggaagccgagtgcatgtggaagttcgtgcggctgctgttcgattcgcaggtgctgcac
ggcctgctgcccgaagtcgcggccctgtcccgcgtgcgccagcagcgcaatgacgagggt
acggaagagtcggtgctcgaccatactcttgattgcatgcaccactaccccgaaggcgag
tacaactacgactggctgggcacctttgccatgttgttccacgacgtgggcaagctgtac
acggcagaatacttcgacggtaagtggaacttctaccagcaccatcgcgtgggcgcgaag
gtgacgcgcaagctgctgcgccgcctgcacttctcgccggaagacgtggagcaggtgtgc
catctggtacgccatcacatgcgcttccacttcatgctcaccgaccggggcatccgccgc
ttcaagtcgctggacgagtacccccggctcatcgaaatggcccgcgccgatctggaagcc
cgaggcggcagctacacctacttcaatcacaacatgaagtacctggagcgcgccgaaacc
ccggaacagatgctggaacctctgctgaacggcaacgagatcatggaattcaccaacctg
caccccggcccccaggtgggcatgctgcgcgatgcgctgctgaaggcgcaggtggcgggc
gaagtgaccagcgtacccgaggccgtggactacgtgcgcgagtacaaggcgaagaatttc
ggctag
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