Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1563
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Entry
DvMF_1563 CDS
T00816
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DvMF_1563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_1563
Enzymes [BR:
dvm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DvMF_1563
DNA repair and recombination proteins [BR:
dvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DvMF_1563
Prokaryotic type
DvMF_1563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACL08511
UniProt:
B8DRX2
LinkDB
All DBs
Position
complement(1927836..1929035)
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AA seq
399 aa
AA seq
DB search
MARRRILVDDPARGPGDGTGGVPGGVPDTRATAASAAPSPDVAALPVQDGQPQAVPRRRG
RPRKVEGGATAATSMAGTTGSPGGMPGSLGGMSGGAAGRAPAARACSAPPRAPAIADAAA
LAGPDPAVLAGPDPLAGTGWPDNVPELAARRHLEVLATVEALRAQGRTIYPARDDVFRAL
RATPWDAVRVVILGQDPYHGPGQAHGMAFSVADGVPLPRSLRNIFKEVAADCGAESGRSR
LAAQADKSGASSRPAPRLASRPAGGTPADAPLLAPFGNVPPASAAPSGNLSRWAAQGVLL
LNTMLTVEDGQPNSHAGLGWEGVTRGIVAALGARPQPCAFLLWGRPAHGFAALVTHPAHL
VLTAAHPSPLSASRGFFGCAHFSRVNAWLAERGDVPVRW
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcgcaggattctggtggatgatccggcgcgcgggccgggggacgggacgggg
ggcgtgccggggggcgtgccggacacgcgggcgactgcggccagtgccgcgccgtcaccc
gatgtcgcggccttgccggtgcaggacggccagccgcaggcagtgccccggcggcgcggc
aggccgcgcaaggtcgagggcggcgcgaccgctgcgacctccatggcgggcacaaccggc
tcacccggcgggatgcccggttcacttggcgggatgtccgggggggcggctggccgcgcg
cccgctgcaagggcatgctccgccccgccccgtgcgcctgccattgccgatgccgctgcg
ttggctgggcccgatcccgcagtactggccggaccggatccgctggctggcaccggctgg
ccggacaacgtgccggaactggctgcccgcaggcatctggaagtgctggccacggtcgag
gcgttgcgcgcacaggggcgcaccatctaccccgcccgggacgacgtgttccgtgccttg
cgcgccacgccgtgggacgcggtgcgggtggtgattctggggcaggacccctaccacggg
ccggggcaggcccacggcatggccttttccgttgccgacggggtacccctgccgcgctcg
ctgcgcaacattttcaaggaagtggccgccgattgcggcgcggaatcggggcgatcgcgc
ctcgcggcccaggcggacaaatccggcgcgtcttcgcgtccggctccgcgcttggcttcg
cgcccggctggcggcacgcccgcagacgctccgctgctggctccgttcggcaacgtgccc
cccgcatcggcagccccctcgggcaacctgtcgcgttgggccgcgcagggcgtgctgttg
ctgaacacgatgctcaccgtggaggacgggcagcccaacagccatgcgggcctcggctgg
gagggggtgacgcggggcatcgtggccgcgctgggcgcacgcccgcagccctgcgccttc
ctgctctggggcaggcccgcgcacgggtttgcggcgctggtgacccatccggcgcatctg
gtgctgacggcggcgcatccctcgccgctgtcggcctcgcgcgggttcttcggatgcgcc
catttttcgcgggtcaatgcctggctggcggagcggggagatgttcccgtccgctggtga
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