Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1880
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Entry
DvMF_1880 CDS
T00816
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CopB
Motif
Other DBs
NCBI-ProteinID:
ACL08823
UniProt:
B8DMH9
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Position
2312841..2315651
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AA seq
936 aa
AA seq
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MFPPFPPRSAHAATRPPRARYLSVPQLVTVVGVALLALLALSGPLRAANTGGTEQTDPYN
PVMNAYVGQYDTASYVGIDGGYTGNVYGGQSSGNFVQANTVILTTGTVTGTVYGGSSWSD
EAKQNIVTLYGAQVGEYIFGGHVLAGTSAATDNTVNINGGTVESVYGGASASGSALDNTV
TINGLGSAWSPNGAVVNYDVYGGFVGNAADSSITAAYNSVNMNGGMVSGNIYGGMVESGA
GAATDNTVTMTYGTVAEDITGGESTSGPSRRNAVIISGGSVNGYVYGGYSYSGDATDNTV
NISGLAAVGGYLYGGLAESGGVATGNTVTISGGSVDGDVISGSSGVATGNTVNISGGTLG
RNVYGGFGSSGTAQDNDVNISGGTVVGYVYGGRADGSGTAANNVVTISGGTVLGYVYGGR
ASGSGDALLNTVAITGGELHDNVYGGSSNNSDATGNTVRIEGTPTFGPTSALYGGNANTG
TGDVRTGNTLEMWTTGVSVKGLHNFQNLYFFLPSTTAAGSTVLTVADAVDISTPATGPST
GATTVGVGIMGGGAPTLATGDSVTLIKSNTGLTADAGLTNTTTGMQGISTLYTFTLETSA
DALVARVGEASNTHEGIRKSPSEGQAAGAAALTQGGDLAGGQGMTSARQAAGAASAGGAA
QGGWGGFGSTSGGMSTYATGSHVDARGVSIMLGLAKRFGLDGADLVAGPFFEAGVSSYDS
YNDGPGGDDSIHAWGDSNYQGGGLLARLEATQGMLKGLYGEVSARAGSLHTTYRSDDLNP
ALGRASYQTTSGYVGAHGGLGYVWDMDEKTDLDVYGKYFWTRTEGSSATVLGDDLDFDAV
DSQRLRAGARLSRDLAANIRPYVGAAWDHEFDGSARSTLNGQGVAAPSLAGDTGVGEVGL
VWKPFEDGGFSVDLGAQGYAGMRQGWSGSLQLKYEF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgccctttcccccacggtccgcgcatgccgccacaaggcccccccgcgcacgc
tacctttccgtaccgcaactggtcaccgtggtgggcgtggccctgctggccctgctggcc
ctgagcgggccgctgcgggccgccaacaccggcggcaccgaacagacagacccgtacaac
cccgtcatgaacgcctacgtcggccaatacgacacggccagctacgtcggcattgatggc
gggtacaccggcaacgtctatggtggccaaagctctggcaactttgtccaggccaacacc
gtgatcctgaccaccggcacggtgaccggcactgtttacggcggcagcagctggagcgac
gaggccaaacaaaacatcgtaaccctgtacggcgctcaggtcggcgagtacatcttcggc
gggcatgtccttgccggcacgagtgcggccacggataacaccgtgaacataaatggcggc
acggtggagagcgtgtacggcggcgcctctgcctccggcagcgccctggacaacaccgtg
accataaatggcctgggcagcgcctggagcccaaatggcgccgtggtgaactacgacgtc
tacggcggattcgtcggcaacgccgccgactcctccatcaccgcagcctacaactcggtg
aacatgaacggcggcatggtgagcggcaacatctacggcggcatggtcgaatccggcgcg
ggtgcggccacggacaacaccgtgacaatgacctatggcacggtggccgaggacattacc
ggcggcgaatccacctccggcccgtccaggcgcaacgccgtgatcatttccggcggctcg
gtaaacggatacgtctacggcggctattcctactccggcgatgccacggacaacaccgtg
aacatctccggccttgctgccgtgggcggctacctttatggcggcttagccgaatccggc
ggcgtcgccacgggcaacaccgtgaccatttccgggggctcggtggacggcgacgtgatc
agtggcagctccggcgtcgccacgggcaacaccgtgaacatttccggcggcacgctgggc
cgcaacgtctacggcggcttcggcagctctggaaccgcccaggataacgacgtgaacatt
tccggcggcacggtagtcggctatgtctacggtggccgagccgacggcagcggcaccgcc
gcgaacaacgtagttaccatttccggcggtacggtgctcggctatgtctacggtggccgc
gccagcggcagcggcgacgccttgctcaacacggtggccattaccggcggcgagttgcac
gacaacgtctatggcggctcctccaacaacagcgacgccacgggcaacaccgtgcgcatc
gagggcactcccaccttcgggccaaccagcgccctgtacggcggcaatgccaacacgggc
accggcgacgtgcgcaccggcaacaccctggaaatgtggaccacgggcgtttcggtaaag
gggctgcacaacttccagaacctgtatttcttcctgccgtccaccaccgcagcgggaagc
accgtgctcacggtggccgacgccgtggacatcagcacgcccgccaccggtccttccacg
ggcgccaccaccgtgggcgtgggcatcatgggcggcggcgcccccacgctggccacgggt
gacagtgtgaccctgatcaagtccaacaccggcctgacggctgacgcaggcctgaccaac
accaccacgggcatgcagggcatctccaccctgtacacattcacgctggagacctccgcc
gacgccctggtcgcccgtgtgggcgaggcctccaacacccatgagggcattcgcaaatcc
ccctccgaaggacaggccgccggggcggcagccctgacgcagggcggcgacctggctggc
gggcagggcatgaccagcgcaaggcaggcggcaggtgccgccagcgcgggcggggcggcg
caaggcggctggggcgggtttggctccacctccggcggcatgtccacctacgccaccggt
tcgcatgtggacgcgcgaggcgtgtcgatcatgctgggccttgccaagcgcttcgggctg
gacggcgcggacctggtggccgggccgttcttcgaggcgggcgtgagttcgtacgacagc
tacaacgacggccccggcggcgacgattccattcacgcctggggcgacagcaactaccag
ggcggcggtctgctggcacggctggaggccacgcaaggcatgctcaagggcctgtacggt
gaagtctcggcccgcgccggcagcctgcacaccacctaccgcagcgacgacctgaacccc
gccctgggccgggcctcgtaccagaccacctccggctacgtgggcgcgcacggcggcctg
ggctacgtgtgggacatggacgaaaagaccgacctcgacgtgtacggcaagtacttctgg
acccgcaccgagggcagttccgcaaccgtccttggcgacgacctggatttcgacgcggtg
gactcgcaacggctgcgcgcgggcgcacgcctgagccgcgaccttgccgccaacatccgt
ccctacgtgggcgcggcgtgggaccacgagttcgacggttccgcgcgcagcacgttgaac
gggcaaggcgtggcggccccgtcgctggccggagacacgggcgtgggcgaagtgggcctg
gtgtggaagcccttcgaggacggcggcttttccgtggaccttggcgcacagggctacgcc
ggcatgcgccagggctggagcggctcgctgcaattgaagtacgaattctga
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