Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1936
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Entry
DvMF_1936 CDS
T00816
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_1936
Enzymes [BR:
dvm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DvMF_1936
DNA repair and recombination proteins [BR:
dvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DvMF_1936
Prokaryotic type
DvMF_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
ACL08879
UniProt:
B8DQ15
LinkDB
All DBs
Position
complement(2388937..2390421)
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AA seq
494 aa
AA seq
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MASQNANSPLAFSSVVDPRRVVGMHGGPAAHSAPGARPGRGPVLYWMHREHRARDNWALL
HAHAEAARLGAPLAVVWCLANSFLGATIRQFGFLLRGMEETQRHLAAAGIPLVVLRGNPP
EEVVRYARSANAALVVTDFDVLRLKRTWLASAARGLAGVCSLHEVDGRNVVPCRVASPKR
EYAARTLRPKIHRLLPEFLTPIPALPPASSVSGASSVPVPDVDWASLRDNLAVDRTVAEV
GPLPGMPDIAPGEDAARAALDDFIHARLHRYHLRNDPNAHGVSGLSPYLHFGMLSAQRAA
LAAQAHLEAPDDCRASFLEELIVRRELADNFCLHAQDYDAVTCFPDWALATLDKHRHDPR
PALYDEAQLAAARTADPLWNAAQTEMVCAGRMHGYLRMYWAKQILLWSPTPEDAVRTAVT
LNDRYFLDGRDSNGYTGIAWSAGGVHDRPWGERPVQGTIRSMTYNGARSKFDVGAYIRRM
QALRGGEGEQGTLF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcagaatgcaaactcgccgctggccttttcgtcggtggtggacccccgccgc
gtggtgggcatgcacggcggacccgctgcacattcggcgccgggcgcaaggccgggtcgt
gggccggtgctgtactggatgcaccgcgagcaccgcgcacgggacaactgggcgctgctg
catgcccatgccgaggccgcccggctgggtgcgccgctggccgtggtgtggtgcctggca
aacagctttctgggcgccaccatccggcagttcggctttctgctgcgcgggatggaggaa
acccagcgccatctggcggcggcgggcatcccccttgtggtgctgcgcggcaacccgccg
gaagaagtggtgcgttacgcccgttcggcaaatgccgcgctggtggtcaccgacttcgac
gtgctgcggctgaaacggacgtggctggcatccgccgcgcgggggctggccggggtctgc
tccctgcacgaggtggatggccgcaacgtggtgccctgccgggtggcatcgcccaagcgc
gaatacgcggcccgcaccctgcgcccgaaaatccaccgcctgctgccggaattcctgacg
cccatccccgcgttgccgcccgcgtcttccgtgtctggcgcgtcttccgtgcccgttccc
gacgtggactgggcatccctgcgcgacaatcttgccgtggaccgtaccgtggccgaggtg
ggcccgctgccgggcatgccggacatcgcccccggcgaggacgccgcccgcgccgccctg
gacgatttcatccacgcccgcctgcaccgctaccacctgcgcaatgatcccaatgcccat
ggcgtgtccggcctgtcgccgtacctgcactttggcatgctgtccgcccagcgggccgcg
ctggcggcccaggcccatctagaggcgccggacgactgccgcgcctcgtttctggaagaa
ctgatcgtgcggcgcgaactggccgacaatttctgcctgcacgcgcaggactacgacgcc
gtcacctgttttcccgactgggcgctggccaccctggacaagcaccgccacgacccgcgc
ccggcactgtacgacgaggcccaactggccgccgcgcgcacggcggacccgctgtggaac
gcggcccagaccgagatggtgtgcgccggacgcatgcacggctacctgcgcatgtactgg
gccaagcagatactgctgtggtcgcccacgccggaagacgccgtgcgcactgccgtgacc
ctgaacgaccgctactttctggatggccgcgacagcaacggctacaccggcatcgcctgg
tcggcaggaggggtgcacgacaggccgtggggcgaacggcccgtgcagggcaccatccgt
tccatgacctacaacggggcgcgctccaagttcgacgtgggcgcgtacatccggcgcatg
caggcgctgcgcggcggcgagggggagcagggcacgctgttctga
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