Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_1940
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Entry
DvMF_1940 CDS
T00816
Name
(GenBank) Lytic transglycosylase catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
DvMF_1940
Enzymes [BR:
dvm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DvMF_1940
Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DvMF_1940
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ACL08883
UniProt:
B8DQ19
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All DBs
Position
2394830..2396575
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AA seq
581 aa
AA seq
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MHNPIFTTRERFALFGLAIAQAFLLLLILLPAPRDSDVLRVAAPARERVLTRLSPYGPGF
EQELLTAFCARYGYELRWVKADNRDEALRLVADGYADVAVGFGTAPDAHGAGGAGGNERD
GHDDGSGTNASGASGASGASGASGASGIAAAANDATGATDAAPGISLAALLTRLATGTDP
IPLTDLVAGPAYDHARPVLVRWSEPDLPAPVHAALRDTGTTEAARHGQTSDGLRSALLLN
TWETSAGPAVPPVQGLLPPSSGPALPSGESTVDTASDDAPRHAMVAGDSWRLWQPFMAEP
TAGRVTGKPLSYHWYWRGDDTTLAPRLDEFWRERTAPADTLLDDLTERYFGFLPESLGVA
EDGDYTGASGYADIFDLMDLMTVVTEKLPAHAPAISRAAAQSNIDPLLLSAVIFQESRFD
ASARSKTGVRGIMQLTQNTALLLKVNRMNPSQSIRGGARYLRMLWDSLDDLDLQPWDRWF
FTLAAFNQGPGHLRDAIRLNQDLGGSGRTWRELKDTFPKLARPRYHARTRYGYCRGYEAV
AFVESVRYYYYILNGLVALSRPEAEHLAPLLDAVPVRWPTV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatcctatcttcaccaccagggaacgctttgcgctgttcggccttgccatcgcc
caggcgttcctgctgctgctcatcctgctgcccgccccgcgcgattccgacgtgctgcgc
gtggccgcccctgcccgcgaacgggtgctgacgcgcctttcgccctacggccccggcttc
gaacaggaactgctgaccgccttctgcgcccgctacggctacgaactgcgctgggtgaag
gccgacaaccgcgacgaggccctgcgactggtggccgacggctacgccgacgtggccgtg
ggcttcggcaccgcgcccgacgcccacggggcaggcggcgcaggcggcaacgaaagggac
ggccacgatgacggctccggcaccaacgcgtccggcgcatccggtgcgtccggcgcatct
ggcgcatccggtgcatccggcattgccgctgccgcaaacgacgccacgggcgcaacggac
gccgcgcccggcatttcgctggccgcgctgctgacccggctggccaccggcaccgacccc
atccccctcaccgacctggtggcgggaccggcctacgaccatgcccgcccggtactggtg
cgctggtcggaaccagatctgcccgcgcccgtgcacgccgcgctgcgcgataccggcacc
accgaagccgcacggcacggccagacctccgacggactgcgctctgccctgctgctgaac
acctgggaaacctccgcgggcccggctgtaccccccgttcaggggctgctgccgccttcc
agcggcccggcccttccgtccggcgaatccaccgtggacaccgcatccgacgacgccccc
cgccacgccatggtggccggcgactcgtggcggctgtggcagcccttcatggccgaaccc
acggcgggccgggtcacgggcaagcccttgtcctaccattggtactggcgcggcgacgac
accaccctggcccccaggctggacgaattctggcgcgagcgcaccgccccggcagacacc
ctgctggacgacctgaccgagcgctacttcggctttctgccggaatcgctgggcgtggcc
gaagacggcgactataccggggcatccggctatgcggacatcttcgacctgatggacctg
atgaccgtggtgaccgaaaagctgcccgcccacgcccccgccatcagccgcgccgcggcc
cagagcaacatcgacccgctgctgctgtccgccgtgatcttccaggaatcgcgcttcgat
gcctctgcccgcagcaagaccggggtgcgcggcatcatgcagcttacccagaacacggcc
ctgctgctgaaggtcaaccgcatgaaccccagccagtccatccggggcggggcgcgctac
ctgcgcatgctgtgggacagcctggacgatctggacctgcaaccgtgggaccgctggttc
ttcaccctggcggccttcaaccaggggcctggccacctgcgcgacgccatccggctgaac
caggaccttggcggctccggccgcacctggcgcgaactgaaggacacctttcccaaactg
gcgcggccccgctaccacgcccgcacccggtacgggtactgtcgtggctacgaggccgtg
gcattcgtggaaagcgtgcgctactactattacatactcaacgggctagtcgccctctcg
cggccggaagctgagcaccttgcgccgcttctggacgccgtccccgtccgctggcccacc
gtttag
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