Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2083
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Entry
DvMF_2083 CDS
T00816
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvm03032
]
DvMF_2083
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_2083
Enzymes [BR:
dvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DvMF_2083
DNA replication proteins [BR:
dvm03032
]
Prokaryotic type
DNA Topoisomerases
DvMF_2083
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DvMF_2083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
GyrB_hook
ZNHIT3_C
Motif
Other DBs
NCBI-ProteinID:
ACL09026
UniProt:
B8DQA7
LinkDB
All DBs
Position
2591326..2593722
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AA seq
798 aa
AA seq
DB search
MTTPTGQTYTADSITILEGLAAVRKRPAMYIGSTDARGLHHLVYEVVDNSIDEAMAGYCS
RIVVKLHLDNSVTVSDNGRGIPVDLHPKEGKPAVEVVMTKLHAGGKFDNDAYKVSGGLHG
VGVSCVNALSEWLEVTVRRDGKRHRMRFARGAVQGPLEFLGESANHGTTVHFKPDEEIFE
TVQYSYETLRKRFEELSYLNKGLEIEFTDERSAETHVFRADGGIRQFVKDLNSGESGIHP
IIDGEGVTDGVTVDFALQYNAGYKENVLTFANNIRTKEGGTHLAGFKTALTRAINGYIKG
QPDLVKKMKGTVLSGDDVREGLTSVVSVKLPQPQFEGQTKTKLGNSEIAGLVAGIVYDKL
NVHFGENPKDARLIIDKAVDAARARDAARRAKELVRRKGALSDNSLPGKLADCQSKDPAE
SELFIVEGDSAGGSAKQGRDPSTQAILPLRGKILNTERTRFDKMLANKEVKALITAMGAG
IGEDDTDYDKLRYHKVVIMTDADVDGAHIRTLLLTFFFRQYQELIDRGHLYIAQPPLYRV
HSSRFEKFIKDDPELNAFLLERISNDITIRTESGCAFTGPDIVSLMKAIELVSAKVRDVE
NIGIARELFLAFIEYQTRIEPQWFTEEDPNGLRQWLGDRGYTVSAEHEDTDEDSRTFVVF
EDTNGHRTRVGAEFFHSKMYRQAWDALADIRTRCGSLRCTVDRKGETSDAEDIFDLFRLV
LDEARKGINIQRYKGLGEMNPEQLWVTTMNPENRTLLRVTVDDAEEASEAFEQLMGDRVE
PRREFIERNALSVQDLDI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcccacgggacagacctataccgcagacagcatcacgatcctcgagggtctg
gctgccgtccgcaagcgccctgccatgtacatcggctccaccgatgcgcggggcctgcac
caccttgtgtacgaggtggtggacaactccatcgacgaggccatggcgggctactgctcg
cgcatcgtggtcaagttgcacctcgacaacagcgtcacggtcagcgacaacggccgcggc
atcccggtcgacctgcaccccaaggagggcaagcccgcggtcgaggtcgtcatgaccaag
ctgcatgcgggcggcaagttcgacaacgacgcctacaaggtgtcgggcgggctgcacggc
gtgggcgtgagctgcgtgaacgccctttccgagtggctggaagtgacggtgcgccgcgac
ggcaagcgccaccgcatgcgtttcgcgcgtggcgcggtgcaggggccgctggagtttctg
ggcgaatctgccaaccacggcaccacggtgcacttcaagccggacgaggaaatcttcgag
acggtgcagtactcgtacgagacgctgcgcaagcgctttgaggaactttcgtacctcaac
aagggtcttgaaatagaattcaccgatgagcgcagcgcggaaacccacgtgtttcgcgcc
gatggcggcatccgccagttcgtcaaggacctgaattccggcgaaagcggcatccatccc
atcatcgacggtgaaggggtgaccgacggggtgaccgtggacttcgcgttgcagtacaac
gcggggtacaaggaaaacgtgctcaccttcgccaacaacatccgcaccaaggaaggcggc
acccaccttgccggtttcaagacggcgctcacccgtgccatcaacggctacatcaagggc
cagcccgacctggtcaagaagatgaagggcaccgtgctgtccggcgacgacgtgcgcgag
ggcctgacctcggtggtgtccgtcaagctgccgcagccccagttcgagggccagaccaag
accaagctgggcaacagcgaaatcgcggggcttgtggccggcatcgtgtacgacaagctg
aacgtgcacttcggcgaaaaccccaaggacgcgcgcctgatcatcgacaaggccgtggac
gccgctcgcgcccgcgacgccgcccgccgcgccaaggaactggtgcgccgcaagggcgcc
ctgtccgacaactcgctgcccggcaagctggccgactgccagtccaaggacccggcggaa
tcggaactgttcatcgtggaaggcgactccgcaggtggttcggccaagcagggccgcgac
ccctccacccaggccatcctgccgttgcgcggcaagatcctgaacaccgagcgcacccgc
ttcgacaagatgctggccaacaaggaagtgaaggccctcatcaccgccatgggcgctggc
atcggcgaggacgacaccgactacgacaagctgcgctaccacaaggtcgtcatcatgacc
gacgccgacgtggacggcgcgcacatccgcaccctgctgctgacctttttcttccggcag
taccaggaactcatcgaccgcggccacctgtacatcgcgcagccgcccctgtaccgggtg
cacagcagccgcttcgaaaagttcatcaaggacgatcctgagctgaacgcctttttgctg
gaacgcatcagcaacgacatcaccatccgcaccgaatcgggctgcgccttcaccgggccg
gacatcgtctcgctcatgaaggccatcgaactggtgtccgccaaggtgcgcgacgtggaa
aacatcggcatagcccgtgaactgttcctggccttcatcgagtaccagacccgcatcgaa
ccccagtggttcaccgaagaagaccccaacggcctgcgccagtggctgggcgaccggggc
tacaccgtgtccgccgagcacgaggacaccgacgaggacagccgtaccttcgtggtcttc
gaagataccaacggccaccgcacccgcgtgggggccgagttcttccactccaagatgtac
cgccaggcctgggacgcccttgccgacatccgcacccgctgcggcagcctgcgctgcacc
gtggaccgcaagggcgaaaccagcgacgccgaagacatcttcgacctgttccgcctggtg
ctggacgaagcccgcaagggcatcaacatccagcgctacaagggcctgggcgaaatgaac
ccggaacagctgtgggtgaccaccatgaacccggaaaaccgcaccctgctccgcgtcacc
gtggacgacgccgaagaagccagcgaagccttcgaacaactcatgggcgatcgggtggag
ccccgccgcgagttcatcgaacgcaatgccctgtccgtgcaggatttggatatctag
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