Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2269
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Entry
DvMF_2269 CDS
T00816
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03030
DNA replication
dvm03430
Mismatch repair
dvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DvMF_2269
03430 Mismatch repair
DvMF_2269
03440 Homologous recombination
DvMF_2269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvm03032
]
DvMF_2269
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_2269
Enzymes [BR:
dvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DvMF_2269
DNA replication proteins [BR:
dvm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DvMF_2269
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DvMF_2269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_18
AAA_14
AAA_16
TsaE
AAA_2
AAA_19
TIP49
ResIII
SLFN-g3_helicase
nSTAND3
SKI
Mg_chelatase
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACL09212
UniProt:
B8DQU3
LinkDB
All DBs
Position
2851219..2853285
Genome browser
AA seq
688 aa
AA seq
DB search
MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK
ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY
KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE
NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV
LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE
AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLNLA
MLPRLVSLEQLSRGGGAGPAGGRGMPGGVGGVGGGPAGGSGMPGGGAGGHGSMPPRQGGY
GGYGAQSGQSGQPGQFGQSGQSGESFPQAQPPQGRYPGPGQVRPQAASSASSMSSSSGVP
GAPGMQPAGGFPRPERAAPAAAPAPSRGGSDTSLPWDDVPYPAPGGAAFGDAAIGGTSSV
PGAPDSVASASDTPDTLGAPDAPAPHEDGTWVGFVQYCVERNGEGGSSLSMLRQAQGHCA
DGRLTVSTRSSTLYNQLSVPGNEALLVARARAYFGTDVRVEVLPPTTRIKTPSELRAEAE
RHPAVSLLREQFGATMLSCRPLADGRLQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcccccctcaccgccagataccgcccgcagaccttcgccgaggtggccggg
caggagacggtaaaggccatcctttcccgcgccgcggcggaagaccgcgtggcccccgcc
tacctgttcagcggcacgcgcggggtgggcaagaccaccatcgcccgcatcctggccaag
gcgctgaactgcgaaaaggcccccaccggcgagccatgcaatacctgcgaacagtgccgc
aaggtggtcatgggcaaccacgtggacgtggtggaaatcgacggcgcctccaaccggggc
atcgaggacgcccgccgcctgcgcgaggccatcggctacgcgcccatggaaggccgctac
aaggtcttcatcatcgacgaagcccacatgctgacgcgcgaggcgttcaacgccctgctg
aaaacgctggaggaacccccgccgcgcgtcaccttcgtgctggccaccaccgagccgcac
aaatttcccgtgaccatcatcagccgctgccagcacttcaccttcaagcggctgcccgag
aacgagctggaagcccatctgaccggcgtgctgacccgagaggggcaggacttcgacccg
gcggcggtgcggctcatcgcgcggcgggccgcaggcagcgtgcgcgactccatgtcgctg
ctgggccaggtgctggcccttggcggcgaccgcctgaccgtggagggcgcgcgcggcgtg
ctgggcctggccgggcaggaactgttcttcgaggtgatgcaggccctggcctcgcaggat
tgcgtggcggtatccgccgtggtgcgcgacctgctggacaagggcgtggacatagggttt
ttcctgcgcgagctggcctctacctggcgcaacctgttcatgctgcgtcaggcgggcgag
gccgccctgcccgcgctggacctgccggaagaagaagcccgccagtggctggaatgggcg
ccgaagttcgagatcacgcacatacacgcctgctggcagatgaccctggaaggccagcgc
cgcgtgctgaccagtctggaacctgccatggcgctggaactgctgctgctgaacctggcc
atgctgccgcgccttgtctcgctggagcagctgtcgcgcggcggcggggctggccccgcc
ggtgggcgcggcatgcccggtggcgtgggtggtgttggcggcggacctgctggcggttcg
ggcatgcccggcgggggcgcggggggccacggctccatgccgccccggcagggcgggtac
ggcggatatggcgcccaatccggccagtccggccagcccggccaattcggccaatccggt
cagtccggcgaatcgttcccgcaggcccagccgccgcagggccggtatcccggtccgggg
caggtccggcctcaggccgcgtcgtcggcatcgtccatgtcttcgtcgtccggcgtgccc
ggtgcgccgggcatgcagcccgcgggcggctttccccgtcccgagcgtgccgccccggcg
gcggcccccgccccctcgcgcggcgggtcggacacctcgctgccgtgggatgacgtgccg
tatcccgcacccggcggggctgctttcggcgacgctgccatcgggggcacctcaagtgtc
cccggtgcccccgattccgtggccagcgcgtctgatacgcccgatacattgggcgcaccc
gatgcacccgcccctcatgaggacggcacatgggtcggcttcgtgcaatactgtgtggag
cgcaacggcgagggcggcagcagcctttccatgctcaggcaggcgcagggacattgtgcc
gatggcagactgacggtgtccactcggtccagcacgctgtacaaccagctgtcggttccc
ggcaacgaagcgcttctcgttgcgcgtgcccgcgcctatttcggcaccgacgtacgggta
gaggtgcttccgcccaccacccgcatcaagaccccctcggaactgcgcgccgaggccgaa
cggcaccccgccgtgagcctgctgcgcgaacagttcggggccaccatgctgtcctgccgg
cccctggccgacgggcggcttcaatag
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