KEGG   Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2427
Entry
DvMF_2427         CDS       T00816                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
dvm  Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:dvm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dvm02044]
    DvMF_2427
Secretion system [BR:dvm02044]
 Type III secretion system
  Type III secretion core apparatus
   DvMF_2427
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C FHA
Other DBs
NCBI-ProteinID: ACL09368
UniProt: B8DMS8
LinkDB
Position
3064461..3066029
AA seq 522 aa
MSASTTALLRIFTGPHVGAEVVLPEGVHVVGTDDSCDIILSDAALAARHAALTVATRGEG
PGAATEVHVAPLDGAVRAGDAEIPAQGAPLAAGTGCWLGDTCLAWNRPGAEWGDVLARPR
AGGEGGGPVDATPQPSAPAEDISSGVAPGDATPGAQPAPTKSQDSPAADAHDVGGLTLPG
GTVAVPPPRRGRSVVAGLLALVCAVAIVVTVETRPPAPAERVAAVEEALRGAGVTSLEVA
SGDGGVVVRGLLDNDGQRAAVWKVARNLLYPVQIDVAVRDDVVHAVQAAFNSRALYPEVE
FMDAQSAARQQGEAPAPLKVAGYVRDGLVEAWAFSALRDDVPSLPPVARDIRYASDVAPV
LDGLLGGAGLRHVQVRYLPGTVELAGDLDARQRERLDEVLAYARAHLGVPVRFAVVRAAP
VVQPVAAQSGGRPQPALSAVSGPVAASDSAMAAAQAGDPLEGLQVRGVTLNPLRFVTIGD
GQRIFEGGMLPGGYVLESISTKELHLRKDGRSTTYRLRGSHE
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagcgcgtccaccaccgcattgctgcgcattttcaccggcccccacgtgggggctgag
gtcgttttgcccgaaggcgtccatgtcgtcggtacggacgattcgtgcgacatcatcctg
agcgatgcggccctggccgcgcggcatgccgcgctgaccgtggcgacgcgcggggaaggg
ccgggggccgcgaccgaagtgcatgtggcgccgctggacggcgccgtgcgcgcgggcgat
gccgaaattccggcccagggtgccccgctggcggcgggcacgggctgctggctgggcgat
acctgccttgcctggaaccggcccggcgccgaatggggcgacgtgctggcccggccccgt
gcgggcggcgagggcggcggccccgttgatgccaccccgcaaccttccgcaccagccgaa
gatatttccagcggcgtcgcgcccggtgatgccactcccggcgctcagccagcgccaacg
aagtcgcaggattcgcccgctgcggatgcccacgatgttggcggcctgaccctgcccggc
ggcaccgttgccgttcccccaccccggcgtggcagatccgttgtggcgggcctgctggcc
ctggtgtgcgccgtcgccatcgtcgtcaccgttgaaacgcgcccgccagcccccgccgaa
cgtgtggccgccgtggaggaagccctgcgcggcgccggggtgaccagcctggaggtggcc
tccggcgacggcggcgtggtggtgcgcgggctgctggacaacgacggccagcgcgccgcc
gtgtggaaggtggcacggaacctgctgtatcccgtccagatagatgtggccgtccgcgac
gacgtggtgcacgcggtgcaggcggccttcaacagcagggcactgtatccggaggtcgag
ttcatggacgcgcagtccgccgcacggcagcagggcgaagcgcctgcccccctcaaggtg
gccggctatgtccgggacggactggtggaggcctgggccttcagcgcgctgcgcgacgac
gtgcccagtctgcccccggtggcccgcgacatccgctacgccagcgacgttgcgcccgtg
ctcgacgggcttctgggcggcgcggggctgcgccatgtgcaggtgcgctacctgccgggc
accgtggaactggcgggcgacctggatgcgcgccagcgcgaacggctggacgaggtgctg
gcctatgcccgcgcccatctgggggtgcccgtgcggtttgcggtggtgcgcgccgctccg
gtggtgcaacccgtggcggcgcagtcgggcggacgcccgcagcctgcgttgtcggcagtc
tccggcccggttgcggcctccgattcggcgatggccgccgcgcaggctggcgacccgctg
gagggattgcaggtgcgcggcgtgaccctgaacccgttgcgcttcgtcaccatcggcgac
gggcagcgcattttcgagggcggcatgctgcccggcggctacgtgctggagtcgatttcc
acaaaggaactgcatttgcgcaaggatggacgttcaaccacctaccggctgcgaggtagc
catgagtga

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