Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2503
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Entry
DvMF_2503 CDS
T00816
Name
(GenBank) putative transcriptional regulator, AsnC family
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00860
Porphyrin metabolism
dvm01100
Metabolic pathways
dvm01110
Biosynthesis of secondary metabolites
dvm01240
Biosynthesis of cofactors
Module
dvm_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DvMF_2503
Enzymes [BR:
dvm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
DvMF_2503
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_24
HTH_AsnC-type
HTH_Crp_2
MarR
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
ACL09443
UniProt:
B8DN03
LinkDB
All DBs
Position
complement(3156882..3157382)
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AA seq
166 aa
AA seq
DB search
MSRPDDTAPRFTETERRILTIVQKNLPDSATPYADIAAAVGTDEATVLDLLRRMKEDGSI
RRFGASIKHQRAGWTHNAMVAWRVTEQQAEEAGKQAAEHPLISHAYYRPSSAPDWPYELY
TMIHGRHETEHLEVIEQLRRETVLDEYAVLESLRELKKTSMVYFPE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcccgacgacaccgcgccccgattcaccgaaaccgagcgccgcatcctgacc
atcgtgcagaagaacctgcccgacagcgccaccccttacgcagacatcgccgccgccgtg
ggcaccgacgaagccaccgtgctcgacctgctgcgccgcatgaaggaagacggctccatc
cgccgcttcggcgccagcatcaagcaccagcgcgccgggtggacccacaacgccatggtg
gcctggcgcgtcaccgaacagcaggccgaagaggcgggcaagcaggccgccgaacacccg
ctgatctcgcacgcctactaccgcccctcgtccgcgcccgactggccgtacgaactgtac
accatgatccatggccgccacgaaacggaacacctggaagtcatcgaacagttgcgccgc
gaaaccgtgctcgacgaatacgccgtgctcgaatcgctgcgcgagctgaaaaagacctcc
atggtctattttccggaatag
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integrated database retrieval system
