Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2508
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Entry
DvMF_2508 CDS
T00816
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DvMF_2508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvm03019
]
DvMF_2508
03016 Transfer RNA biogenesis [BR:
dvm03016
]
DvMF_2508
Enzymes [BR:
dvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DvMF_2508
Messenger RNA biogenesis [BR:
dvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DvMF_2508
Transfer RNA biogenesis [BR:
dvm03016
]
Prokaryotic type
tRNA degradation factors
DvMF_2508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
ACL09447
UniProt:
B8DN07
LinkDB
All DBs
Position
complement(3162451..3164721)
Genome browser
AA seq
756 aa
AA seq
DB search
MQSVFNATRVSAVVGGKEIILETGRLANQAHGAVWVQCGGTVVLVTACTQPLERDMGFFP
LTVDYSEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPVRPLFTKGFRDEVQILANV
ISADQENDSDVLAVTGASAALSISPIPFEGPVAGARIGRVNGEFVLNPTMKEMEASDLAI
VIAASRDSVVMVEGEAHFVPEDVIVAALEWAHKEIQPLIDAQLKLMELVGKAKMAVTPPV
ENAELKARVAELATTELDAALRIPEKMARKDARKAVKEKVLEALLADPALAENANLGREV
GDMLGSLEKVLVRRRILKEGTRIDGRDTKTVRPILIEAGLLPRAHGSALFSRGETKSLVV
ATLGSSTDSQRMDSLVGDVTKKFMLHYNFPPYSVGEVKMSRVSRREIGHGALAEKALKPV
LPQDDSFPFTLRVVAETMESNGSSSMAAVCGGSLSLMDAGVPVTAPVAGVAMGLIKEEGE
YLVLTDILGDEDALGDMDFKIAGTAEGITAVQMDIKITGLPTDVMARAMAQAREARLHIL
AEMAKVLEAPRTELSKYAPQHAEVFVNPDVIRIIIGPGGKNIKAITAATGASIDIEDSGK
VSIFAPTYEAMEMAREMVQYYDQRAELGKNYVGKVRKVLEIGAIVEILPNLEALVHISQL
DTNRVEQAGDVARLGEDMTVKVIEINGDRIRASRKAVLLEEQGVEWNPEDTARPSGPPRD
RGDRGDRGGRGDRGGDRRGGDRGGRGGDRGRGGDRR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgttttcaacgctacccgcgtctccgccgttgtcggcggtaaagaaatcatc
ctcgagaccggtcgcctcgccaatcaggcgcacggcgcggtctgggtgcagtgcggcggc
accgtggtgctggtcaccgcgtgcacccagcccctggaacgcgacatgggcttttttccg
ctgaccgtggactactccgaaaagatgtacgccgcgggccgtattcccggcagcttcttc
cgccgcgaaatcggtcgccccagcgaacgcgaaaccctggtctctcgcctcatcgaccgt
ccggtgcgcccgctgttcaccaagggcttccgtgacgaagtgcagattctcgccaacgtc
atttccgccgaccaggaaaacgacagcgacgtgctggccgttaccggcgcctccgccgcg
ctgtccatttcgcccattcccttcgaaggcccggtggcaggcgcgcgcatcggccgtgtg
aacggcgagttcgtgctgaaccccacaatgaaggaaatggaagccagcgaccttgccatc
gtcatcgccgcctcgcgcgattccgtggtgatggtggaaggcgaagcccacttcgtgccc
gaagacgtcatcgtggccgcgctggaatgggcccacaaggaaatccagccgctcatcgac
gcccagctcaagctgatggaactggtgggcaaggccaagatggccgtcactccgccggtg
gaaaacgccgagctgaaggcccgcgtggccgaactggccaccaccgaactggacgccgcc
ctgcgcatccccgaaaagatggcccgcaaggacgcccgcaaggccgtcaaggaaaaggtg
cttgaagccctgctggccgacccggccctggccgaaaacgccaaccttggccgcgaagtg
ggcgacatgctcggctcgctggaaaaggtgctggtgcgccgccgcatcctgaaggaaggc
acccgcatcgatggccgcgacaccaagaccgtgcgccccatcctgatcgaagcgggcctg
ctgccccgcgcccacggttccgccctgttctcgcgcggcgaaaccaagtcgctggtggtc
gccacccttggcagctccaccgacagccagcgcatggattcgctggtgggcgacgtgacc
aagaaattcatgctgcactacaacttccccccctactcggtgggcgaagtgaagatgtcg
cgcgtgtcccgccgcgaaatcggccacggcgcccttgccgaaaaggcgctgaagccggtg
ctgccccaggatgattccttccccttcaccctgcgcgtggtggcggaaaccatggaatcc
aacggctcctcgtccatggccgccgtgtgcggcggcagcctttcgctgatggacgcgggc
gtgcccgtcaccgctccggtggccggcgtggccatgggcctgatcaaggaagaaggcgag
tacctggtgctcaccgacatccttggcgatgaagacgccctcggcgacatggacttcaag
atcgcgggcactgccgaaggcatcaccgccgtccagatggacatcaagatcaccggcctg
cccaccgacgtcatggcccgcgccatggcccaggcccgcgaggcgcgcctgcacatcctg
gccgaaatggccaaggtgctggaagctccccgtaccgaactgtccaagtacgcgccgcag
catgccgaggtgttcgtcaaccccgacgtcatccgcatcatcatcggccccggcggcaag
aacatcaaggccatcaccgctgccaccggcgcgtccatcgacatcgaggacagcggcaag
gtctccatcttcgcgcccacctacgaagccatggaaatggcccgcgaaatggtgcagtac
tacgaccagcgcgcggaactgggcaagaactacgtgggcaaggtgcgcaaggtgctggaa
atcggcgccatcgtcgaaatcctgcccaacctcgaagccctggtgcacatctcgcagctg
gacaccaatcgcgtggaacaggccggcgacgtggcacgccttggcgaagacatgaccgtg
aaggtcatcgagatcaacggcgaccgcatccgcgccagccgcaaggccgtgctgctggaa
gaacagggcgtcgaatggaaccccgaagacaccgcccgcccctccggcccgccgcgtgac
cgtggcgaccgtggcgatcgcggtggccgtggcgaccgcggcggcgaccgccgtggcggc
gatcgcggtggccgtggcggcgaccgtggccgtggcggcgaccgccgctag
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