Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_2510
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Entry
DvMF_2510 CDS
T00816
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvm03016
]
DvMF_2510
Enzymes [BR:
dvm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DvMF_2510
Transfer RNA biogenesis [BR:
dvm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DvMF_2510
Prokaryotic type
DvMF_2510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACL09449
UniProt:
B8DN09
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All DBs
Position
complement(3165245..3166171)
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AA seq
308 aa
AA seq
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MAVLPAQQHGLLVLNKPQGPTSAQCIARVKRLGQKKIGHAGTLDPMARGVLLVLLGHATK
ISGHLMADGEKVYLGTLRLGTTTDTWDAEGSVTATAPYDHVTPDDIRREVENWLGSTEQE
VPPYSAAKHQGQPLYKLSRAGRETPVKTKTVEISRAQVVSCDLPSATFRVTCSSGTYIRS
LAHSLGMRLGCGAMLTELTREYSHPFGIDEAHELDAVLAEPERLPERVIPVTRALPHWPK
LRISAAQEAGVRNGMIVPYLPEAMAELPFAEGLKAIMLAPDDTPVALAETRIVNAQPVWT
VLRGLWSQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcctgccagcacagcagcatggccttctggtgctgaacaagccccagggcccc
acctcggcccagtgcatcgccagggtgaagcggcttggccagaaaaagatcgggcacgcg
ggcaccctcgaccccatggcgaggggggtgctccttgtgctgttggggcatgccacaaag
atttccggccacctgatggccgacggcgaaaaggtgtatcttggcacccttcgccttggc
accaccaccgatacgtgggacgcggaaggcagcgtgacggccaccgccccgtacgaccac
gtgaccccggacgacatccggcgcgaggtggaaaactggctgggcagcaccgaacaagag
gtgccgccctactccgccgccaagcaccaggggcagcccctctacaagctgtcccgggcc
gggcgcgagacgccggtaaagacgaagaccgtcgaaatttcgcgggcacaggtcgtatcg
tgcgacctgccgtccgcgaccttccgggtaacgtgcagttccggtacctacatacggtcc
ctggcccacagcttggggatgcgtttagggtgcggcgccatgcttacggaactgacccgg
gagtacagtcacccgttcggtattgacgaggcgcacgagctagatgccgtgctggccgag
cccgagcggttgccggagcgggtcatacccgtcacgcgagccctgccccactggcccaag
ctgcgcatcagcgcggcgcaggaggcgggggtgcgcaacggaatgatcgtgccgtacctt
cccgaagccatggcggaactgccattcgcagagggattgaaggccatcatgctcgctccg
gacgacacgcccgtggccctggccgagacgcgcatcgtgaacgcgcagccggtctggacc
gtgcttcggggactgtggagccaataa
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