Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_3064
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Entry
DvMF_3064 CDS
T00816
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DvMF_3064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvm03019
]
DvMF_3064
03110 Chaperones and folding catalysts [BR:
dvm03110
]
DvMF_3064
03029 Mitochondrial biogenesis [BR:
dvm03029
]
DvMF_3064
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvm04147
]
DvMF_3064
Enzymes [BR:
dvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DvMF_3064
Messenger RNA biogenesis [BR:
dvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DvMF_3064
Chaperones and folding catalysts [BR:
dvm03110
]
Heat shock proteins
HSP60 / Chaperonin
DvMF_3064
Mitochondrial biogenesis [BR:
dvm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DvMF_3064
Exosome [BR:
dvm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DvMF_3064
Exosomal proteins of other body fluids (saliva and urine)
DvMF_3064
Exosomal proteins of breast cancer cells
DvMF_3064
Exosomal proteins of colorectal cancer cells
DvMF_3064
Exosomal proteins of bladder cancer cells
DvMF_3064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
ACL10001
UniProt:
B8DJC4
LinkDB
All DBs
Position
3869074..3870720
Genome browser
AA seq
548 aa
AA seq
DB search
MASKEILFDVKAREKLSRGVDKLANAVKVTLGPKGRNVVIEKSFGSPVITKDGVTVAKEI
ELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIYREGVKLVAAGRSPMAIKRGI
DKAVEKLVKELGTLAKPTRDQKEIAQIGTISANSDTTIGNIIAEAMAKVGKEGVITVEEA
KGLETTLEVVEGMQFDRGYLSPYFVTDPEKMICELDEPFILCNEKKISSMKDMLPVLEQV
AKMNRPLVIIAEDVEGEALATLVVNKLRGTLQVVAVKAPGFGDRRKAMLQDIAVLTGGTV
VSEDMGVKLENISVADLGTAKRVVVDKENTTIVDGAGKSEDIKARVKQIRAQIDETTSDY
DREKLQERLAKLVGGVAVINVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTAYI
RISRVLDDVKPADDDEAAGVNIIRRAIEEPLRQISSNAGYEGSIVVEKVRDGKDGFGFNA
ASGEFEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEAKKDMPMPGGGMGG
MGGMGGMY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaggaaatcctgttcgacgtcaaggcccgcgaaaagctttcccgcggcgtg
gacaagctcgccaatgccgtcaaggtgaccctcggtcccaagggacgcaacgtggtcatc
gaaaagtctttcggctcgcccgtcatcaccaaggacggcgtgaccgtggccaaggaaatc
gaactcgaggacaagttcgagaacatgggcgcgcagatggtcaaggaagttgcttccaag
accagcgacatcgccggtgacggcaccaccaccgccaccatcctggcccaggccatctac
cgcgaaggcgtgaagctggtggccgccggccgcagccccatggccatcaagcgcggcatc
gacaaggccgtcgaaaagctggtcaaggaacttggcaccctggccaagcccacccgcgac
cagaaggaaatcgcccagatcggcaccatttccgccaactccgacaccaccatcggcaac
atcatcgccgaggccatggccaaggtgggcaaggaaggcgtcatcaccgtcgaggaagcc
aagggtctggaaaccacccttgaagtggtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccgatcccgaaaagatgatctgcgaactcgacgagcccttcatt
ctctgcaacgagaagaagatctccagcatgaaggacatgctgcccgttctcgaacaggtg
gccaagatgaaccgtccgctggtgatcatcgccgaagacgtggaaggcgaagccctggcc
accctggtggtcaacaagctgcgcggcacccttcaggttgtggccgtgaaggcccccggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgccgtcctgaccggcggcaccgtg
gtgtccgaagacatgggcgtgaagctcgaaaacatctcggtggccgaccttggcaccgcc
aagcgcgtggttgtggacaaggaaaacaccaccatcgttgacggcgccggcaagtccgaa
gacatcaaggcgcgcgtgaaacagatccgcgcccagatcgacgaaaccacctccgactac
gaccgcgaaaagctgcaggaacgcctggccaagctggtgggcggcgtggccgtgatcaac
gtgggcgccgcgaccgaaaccgaaatgaaggaaaagaaggaccgcgtcgaggacgccctg
aacgccacccgcgctgcggtggaagaaggcatcgtccccggtggcggcactgcctacatc
cgcatctccagggtgctggacgacgtgaagcccgctgacgacgacgaagccgctggcgtg
aacatcatccgccgcgccatcgaagaaccgctgcgccagatctcgtccaacgccggctac
gaaggttccatcgtggtcgagaaggtgcgcgacggcaaggacggcttcggcttcaacgcc
gcgtccggcgagttcgaagacctgatcaaggccggtgtcatcgaccccaagaaggtcacc
cgcatcgccctgcagaacgcggcctccgttgcctcgctgctgctgaccaccgaatgcgcc
attgccgaaaagcccgaagccaagaaggacatgcccatgcccggtggcggcatgggcggc
atgggcggcatgggcggcatgtactag
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