Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_3097
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Entry
DvMF_3097 CDS
T00816
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00260
Glycine, serine and threonine metabolism
dvm00460
Cyanoamino acid metabolism
dvm00630
Glyoxylate and dicarboxylate metabolism
dvm00670
One carbon pool by folate
dvm00680
Methane metabolism
dvm01100
Metabolic pathways
dvm01110
Biosynthesis of secondary metabolites
dvm01120
Microbial metabolism in diverse environments
dvm01200
Carbon metabolism
dvm01230
Biosynthesis of amino acids
dvm01240
Biosynthesis of cofactors
dvm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DvMF_3097
09102 Energy metabolism
00680 Methane metabolism
DvMF_3097
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DvMF_3097
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DvMF_3097
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DvMF_3097
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DvMF_3097
Enzymes [BR:
dvm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DvMF_3097
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACL10034
UniProt:
B8DJF7
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All DBs
Position
complement(3909346..3910584)
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AA seq
412 aa
AA seq
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MDELLIQDPEVGRAVTLEIERQTGKLELIASENFVSAAVRQAQGSVLTHKYAEGYPGKRY
YGGCEFVDIAENLAIDRAKAIFGCGYANVQPHSGSQANMGVYFACLKPGDTILGMNLSHG
GHLTHGSPVNFSGRLYNVVFYGVKKETGYIDYDEVAALAREHKPTLIVAGASAYPRTIDF
ARFRAIADEVGAKLMVDMAHIAGLVATGLHPTPIGQAHFTTTTTHKTLRGPRGGMILSDE
DNAKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPTFVDYQQQVVKNAARLAGCLTAAG
YDLVSGGTDNHLMLMDLTAKDITGKDAEHALDKAGMTANKNTVPFETRSPFVTSGVRLGT
PALTTRGMKEAEMEKVAAWIVDALANVNNETRLAAISREVEVFARQFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgctgattcaagacccggaagtgggtcgcgcggtcactcttgaaatcgaa
cgtcagaccggcaaactcgaactcattgcgtccgagaacttcgtctccgccgccgtccgc
caggcccagggcagcgtactgacccacaagtacgccgaaggctaccccggcaagcgttac
tacggcggctgcgaattcgtggacatcgcggaaaacctggccatcgaccgggccaaggcc
atcttcggctgcggctacgccaacgtgcagccccattccggcagccaggccaacatgggc
gtgtacttcgcctgcctgaagccgggcgacaccatcctgggcatgaatctttcgcacggc
ggtcacctgacccacggcagcccggtaaacttttccggtcgcctgtacaacgtggtgttc
tacggcgtgaagaaggaaaccggctacatcgactacgacgaagtggccgcccttgcccgc
gagcacaagcccaccctgatcgtggccggtgccagcgcctacccgcgcaccatcgacttt
gcccgcttccgcgccattgccgacgaggtgggcgccaagctgatggtggacatggcccac
atcgcgggcctggtggccaccggcctgcatcccacgcccatcgggcaggcccacttcacc
accaccaccacccacaagaccctgcgcggcccgcgcggcggcatgatcctgtccgacgag
gacaacgccaagaccctgaacagccagatattccccggcattcagggcggcccgctgatg
cacgtcatcgcggccaaggcggtggcatttggcgaggcgctgcgccccacctttgtcgac
taccagcagcaggtggtgaagaacgccgccaggctggccggttgcctgaccgccgccggg
tacgacctggtttccggcggcaccgacaaccacctgatgctcatggacctgacggccaag
gacatcaccggcaaggacgccgagcacgcgctggacaaggcgggcatgaccgccaacaag
aacaccgtgcccttcgagacccgttcgcccttcgtgacctctggcgtgcgcctgggcacc
cccgccctgaccacgcgcggcatgaaggaagcggaaatggaaaaggttgccgcgtggatc
gtggacgccctggccaacgtgaacaacgagacccgccttgcggccatcagccgcgaagtg
gaagtcttcgcgcggcagttcccgctgttcgcctggtag
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