Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_3205
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Entry
DvMF_3205 CDS
T00816
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DvMF_3205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvm03400
]
DvMF_3205
Enzymes [BR:
dvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DvMF_3205
DNA repair and recombination proteins [BR:
dvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DvMF_3205
RecFOR pathway proteins
DvMF_3205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
DUF815
Mg_chelatase
TIP49
nSTAND3
AAA_22
TsaE
AAA_17
AAA_16
Sigma54_activat
RNA_helicase
AAA_14
AAA_3
NB-ARC
Rad17
NTPase_1
Bac_DnaA
Parvo_NS1
AAA_33
NPHP3_N
NACHT
AAA_28
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACL10141
UniProt:
B8DNJ9
LinkDB
All DBs
Position
4037779..4038783
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AA seq
334 aa
AA seq
DB search
MTAQCKGPDGEGASNCATICMDENVRPRSLDDFIGQDELRANLKVFVAAALERGQAMDHL
LFYGNPGLGKTTLAQIIAAELGVNLVSTSGPVLERSGDLAAILTNLGRHDILFVDEIHRM
PVAVEEVLYPALEDFKLDLVIGQGPGARTVKIDLEPFTLVGATTRIGLLSSPLRDRFGII
SRLEFYSPADLARIVTRTARILGANLTPEGAVEIGRRSRGTPRIANRLLRRVRDFAAVHG
NGTITPEQASAALGRMDVDESGLDQMDRKLLSVLIEHFGGGPVGVKTLAVACSEEVRTIE
DIYEPYLIQCGFLKRTPRGRVATAKAYRHLNLLA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacagtgcaagggaccggatggagagggcgcaagcaactgcgcaaccatctgc
atggacgagaacgtgcggccgcgcagcctggacgacttcatcgggcaggacgagttgcgg
gccaacctcaaggttttcgtggcggcggcgctggagcgcgggcaggccatggaccacctg
ctgttctacggcaaccccggcctcggcaagaccaccctggcccagatcatcgcggcggag
ctgggcgtgaacctggtgtccacctccggcccggtgcttgagcgcagcggcgacctggcg
gccatcctgaccaacctcgggcggcacgacatcctgttcgtggacgagatccaccgcatg
cccgtggcggtagaggaagtgctgtaccccgcgctggaggacttcaagctggaccttgtc
atcggccagggaccgggtgcgcgcacggtgaagatcgacctcgagccgttcaccctggtg
ggggccaccacccgcatcggcctgttgtcgtcgcccctgcgcgaccgcttcggcatcatc
agcaggctggaattctattcgcccgccgaccttgcgcgcatcgtcacgcgcacggcgcgc
atcctgggggccaacctgaccccggaaggcgcggtggaaataggccgccgttcgcggggc
accccgcgcatcgccaaccggctgctgcgccgggtgcgcgactttgccgccgtgcacggc
aacggcaccatcacgccggaacaggcatccgccgcgctgggccgcatggacgtggacgag
agcgggctggaccagatggaccgcaagctgctgtccgtgctcatcgagcactttggcggc
ggcccggtgggggtgaagaccctggccgtggcctgttccgaagaggtgcggaccatagaa
gacatttacgaaccgtacctgatccagtgcggctttctgaagcgcaccccgcgtggccgc
gtggccacggccaaggcctaccggcacctcaacctgctggcctga
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