Defluviicoccus vanus: HQ394_01875
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Entry
HQ394_01875 CDS
T06814
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dvn
Defluviicoccus vanus
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dvn03016
]
HQ394_01875 (rnd)
Enzymes [BR:
dvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HQ394_01875 (rnd)
Transfer RNA biogenesis [BR:
dvn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HQ394_01875 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QNT68335
UniProt:
A0A7H1MXZ9
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All DBs
Position
410210..411430
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AA seq
406 aa
AA seq
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MTLISDTPELIRFCGELAGCEFIAVDTEFMRERTYWPKLCLVQVAGPDASAAVDPLAKGI
DLSPLFTLLSAPETVKVFHAARQDLEIFYHLMGQLPAPVFDTQVAAMVCGFGDQVAYETL
AARLARVKLDKGSRFTDWALRPLSTRQIDYALSDVIHLRPIYRKLLQKLQATGRADWLGE
EMAALTSPAAYAVDPLFAFRRLRSRSTNGHVLAVLREVAAWREREAQARDIPRTWLLRDE
ALLEIAHHMPQKVDDLARTRNLNRKMAESQQGTDILTAVARGMAVPDSECPPVDERRDLP
RGLAPVADLLKVLLKMKCDESGVAQRLVASSDEIELIAADGDSANVPALHGWRRQLFGND
ALQLRTGRLALAVRGRKLALVPLSGAPEAGENAAEDSAEPANFAED
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatcagtgacaccccagagctgatacgcttttgcggggagctggccgggtgc
gagttcatcgccgtcgacaccgagttcatgcgcgagcgcacctactggccgaagctctgt
ttggtgcaggtggccggtccggatgcctcggccgccgtcgatccgctcgccaaaggcatc
gacctcagtcccctgtttaccctcctgtcggcgccggaaacggtgaaggtctttcacgcc
gcacgccaggacctggagatcttctaccatctcatggggcaactgccggcgccggtattc
gatacccaggtcgccgcaatggtctgcggcttcggagaccaagtggcctacgagacgctg
gccgccagactggcccgggtgaaactcgacaagggatcgcgtttcaccgactgggcgctg
cggccactgagcacgcgccagatcgactatgccttgagcgacgtcattcatttgcggccg
atctaccgcaaactgctgcagaagctgcaggcaaccggccgcgccgactggctcggcgag
gagatggcggcgctgaccagtccggccgcctacgccgtcgatccgttgttcgccttccgc
cggttgcgcagccgcagtaccaacggccacgtactggcggtactgcgggaggtggccgcg
tggcgggagcgcgaggcgcaggcgcgcgacatcccccgcacctggctgctgcgcgacgag
gcgctgctcgaaatcgcccaccatatgccgcagaaggtggacgatttggcacggacccgc
aatctgaaccgcaagatggcggaaagtcagcaggggacggacattctgacagcggtggcg
cgcgggatggcagtcccggacagcgagtgcccgcccgttgacgagcgacgtgacctgccg
cgtggcctcgccccggttgccgacctgctcaaggtgttgctgaagatgaagtgcgacgaa
tccggcgtggcgcagcggctggtggcgtcctcggacgagatcgaactcatcgccgccgac
ggtgacagcgccaacgtgccggccctgcatggctggcgccgccagctgttcggcaatgat
gcgctgcaattgcgcaccggccgtctggctttggcggtcaggggacgcaagctggcgctg
gtgccgctgagcggcgcaccggaagccggcgagaacgcggccgaggacagcgctgaacca
gccaacttcgccgaggactag
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