Defluviicoccus vanus: HQ394_04140
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Entry
HQ394_04140 CDS
T06814
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dvn
Defluviicoccus vanus
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvn03009
]
HQ394_04140
Enzymes [BR:
dvn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HQ394_04140
Ribosome biogenesis [BR:
dvn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HQ394_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_12
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QNT71120
UniProt:
A0A7H1N5Y4
LinkDB
All DBs
Position
complement(926969..928222)
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AA seq
417 aa
AA seq
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MEVTVTRIGAQGDGIADGDRGRLYIPLTVPGDRLRVRALSRHGDGFAAELIQVLDPGPGR
SAPPCPHFGHCGGCSLQHLTAEAYRRWLLDRLTEPLARVGLADAAIAPLLQTQPRSRRRA
TFSALRPGAAAGAIVGFQVSRGHAIVDLSDCHVLVPAMMPLLPALRSLFAGILLPRQRID
VAVTAADTGLDVVVGWPASPDLALRETLASFAENADLARLSVLVGDGPVEPIVGRRGVGV
RFGRTVVSLPAGGFLQASREGEAALVAAIRAAAEGRRSAADLFAGAGAFTFPLAEAGIRV
HAVDADRAAIAALTAAAGGLPQVNAEVRDLFARPLRADELNCFEMVIFDPPRAGARAQAE
QLAGSKVTVVVAVSCNPQTFARDARILVDGGYRLDSVTPVDQFLWSAHLELVAVFRR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacggtgacgcgcatcggcgcccagggcgacggcatcgccgatggcgaccgc
ggtcgcctctatatcccgctcacagtcccgggcgatcggctgcgggtgcgagcactttcc
cggcacggtgacggtttcgccgccgaactgatccaggtcctcgatccaggcccgggccga
tccgcaccgccatgcccgcactttggccattgtggcggctgcagcctgcagcacctcacg
gcggaagcgtatcgtcgctggctgctggaccgactgaccgaaccgcttgcccgcgttggt
cttgctgacgctgcgatcgctccgctgctgcagacgcagcctcgcagccggcggcgggcg
acgtttagtgcattgcgtccgggtgcagccgctggcgctatcgtcggcttccaggtgagc
cgcggccacgccatcgtcgatctcagcgactgtcacgtgctggtgccggcgatgatgccg
ctgctgcccgcgctgcggtcgctgttcgccggcattctgctgcctcgccagcgcatcgac
gtggcggtcaccgccgccgacaccgggctcgacgttgttgtcggctggccggcctcgccg
gaccttgccttgcgcgaaacattggcgagttttgctgagaatgccgatctggcgcggttg
tcggtcctggtaggcgacggcccggtcgagccaatcgtcgggcgccgcggtgtcggcgtt
cgcttcgggcggacggtcgtatcccttcccgcaggcggttttctgcaggcgagccgggag
ggcgaggcggcgctggttgcggcgatccgcgctgccgccgaaggccggcgaagcgccgcc
gatctgtttgccggcgcgggtgccttcacctttcccctcgccgaggccggcatccgggtg
cacgcggtcgatgccgatcgtgcggcgatcgcggcgctcaccgccgccgccggcggactg
ccgcaggtcaacgccgaggtgcgcgacctgttcgcccggccgttgcgtgccgacgaactc
aactgcttcgagatggttattttcgatccgccacgcgccggcgcccgtgcccaggcggag
caactggccggctcgaaggtgacggtggtggtggcggtctcctgtaatccccagaccttt
gcccgcgatgcgcgcattctcgttgacggcggctatcgcctcgatagcgtcactccggtg
gatcagtttctgtggtcggcgcacctggaactggtggccgtcttccgccgctga
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