Defluviicoccus vanus: HQ394_07935
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Entry
HQ394_07935 CDS
T06814
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
dvn
Defluviicoccus vanus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
SH3_13
AAA_11
TraI_hel_assoc_N
AAA_22
PIF1
Herpes_Helicase
UvrD_C_2
ToMV_Hel_N
AAA_16
DUF2442
Motif
Other DBs
NCBI-ProteinID:
QNT69270
UniProt:
A0A7H1N0N4
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All DBs
Position
1731067..1734060
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AA seq
997 aa
AA seq
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MAIYHLHVKVIGRKSGSSAVASAAYRSASRLRDDRLERSHDFSAKRGILHSEVMLPEDAP
EAWRDRERLWNDVEAFEVRRDAQLTREVEFALPREMSERQGIELARDFVQAEFVDQGMIA
DLNVHWDIGTDGLPKPHAHVMLTMRAVDENGFGQKVREWNRTGMVERWRERWAELANERL
AELDIDARIDHRSLEVQGIALEPQSQIGAPAQRIEDQGLEADRADMHREIARGNGARIIA
DPTLALDAITHQQSTFTRRDMAMFAHRHSDGIDQFNAVMGAMRSAPDLVELGQDGRGEDR
FTTRAMIETEQRLHRAAELMADRQRHEVNDADRKAALARAEARGLVLSGEQADALAHVTG
GRGLGVVVGFAGTGKSAMLGVAREAWEAAGYEVRGAALSGIAAENLESGSGIASRTIASL
EHGWGQGRDALTARDVLVIDEAGMVGTRQLEHVLCHAAEAGAKVVLVGDPQQLQSIETGA
AFRSIVERHGGAEIGEVRRQREGWQRDATRDLATGRTRDAIQAYDTHGMVHEAASREQAR
ENLIDRWDRDRQASPDLSRIILTHTNDEVRTLNDAARERMRAAGDLGDDVRVTVERGARS
FARGDRIMFLQNERSLGVKNGTLGTIEHVSPQSITVRTDDGLSVSFDLKDYDRLDHGYAA
TIHKAQGMTVDRTHVLATPGLDAHSSYVALSRHRASLDLHYGRDDFISEDRLVRTLSRDR
AKDMASDYARLDPAQGYAERRGITVRERVAEIVRAIVPDKVRGMFDGLRLPVDGGQASER
ERQGVEPERRGAFAGFRPDRAVARAGHNDRKMLARDQAVQRHARALTRIWDMQDKELPVL
PHQKVELQKTRQTLDDYGKHVAHDMEAAYRRDPALARETAAGGATGRAIQAMHGEREIRL
GHERRAEEWIETFKVLDQKSVRQFDAGNYGGHRDTRALMSDMAKQLERDPQLESMIAIRK
QELGLQIESARKSGGGIGRELARLYRLEWELNRGLGL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctatcatcttcacgtcaaggtcattggccgcaaatccggctccagcgcggtg
gcgtcggccgcctaccgctcggcctcgcgcctgcgcgacgaccggcttgagcgcagccac
gacttctccgccaagcgcggcatcctccattccgaggtcatgctgccggaggatgcgccc
gaggcgtggcgcgaccgcgagcggctgtggaatgacgtcgaagccttcgaggtgcggcgc
gacgcgcagctgacccgcgaagtcgagttcgccctgccgcgcgagatgagtgagcgccag
ggcatcgaactcgctcgcgacttcgtgcaggccgaattcgtcgaccagggcatgatcgcc
gacctcaatgtgcattgggatatcggcaccgatggcctgccgaagccccatgcccatgtc
atgctgaccatgcgcgcggtcgacgagaatggcttcggccaaaaggtgcgggagtggaac
cgcaccgggatggtcgagcggtggcgggaacgctgggccgagctggccaacgagcggctg
gctgagctcgacatcgacgcgcgcatcgaccatcgtagcctggaggtgcagggcatcgcg
ctggagccgcaaagccagatcggcgcgccggcgcagcgcatcgaggatcaggggcttgaa
gccgaccgtgccgacatgcaccgcgagatcgcgcgcggcaatggcgcgcgaatcatcgcc
gatccaactctggcactcgacgccatcacgcatcagcaatcgaccttcacgcgccgcgac
atggcgatgttcgcgcatcggcacagcgacggcatcgaccagttcaacgctgtgatgggc
gcgatgcgcagtgcgcccgatctggttgaactcggccaggacggacggggcgaggatcgc
ttcaccacccgtgcgatgatcgagaccgaacagcgcctgcaccgcgccgccgaactgatg
gcggaccggcaacgccatgaggtgaatgacgccgacagaaaggcggcgctggcgcgtgcg
gaagcgcgcggcctcgttctttccggcgagcaggccgacgcgttggcgcatgtcacgggc
gggcgcggtcttggcgtcgtcgtcggctttgccggaacgggaaagagcgcaatgctgggc
gtggcgcgggaggcctgggaggcggcgggctatgaggtccggggcgcggcgctgtccggc
atcgccgccgagaatctggaaagtggatcgggcattgcctcgcgcaccatcgccagcctg
gaacatggctggggacagggccgcgacgcgctcaccgcgcgcgatgtcctggtgatcgac
gaggcgggcatggtcggcacgcgccagctggagcacgtgctttgccatgccgccgaggcc
ggcgccaaggtggtgctggtcggcgatccgcagcagttgcaatcgatcgagaccggcgcg
gcattccgctcgatcgttgagcgccacggtggcgcggaaatcggcgaggtgcgccgccag
cgcgagggctggcagcgcgacgccacccgcgatctggcgaccggtcgcacccgcgatgcg
atccaggcctatgacacccatggcatggtgcatgaggcagcgtcccgcgagcaggcgcgc
gaaaatctgatcgaccgctgggatcgcgaccggcaggcgtcaccggacttgagccgcatc
atcctcacccacaccaatgacgaggttcgcaccttgaacgacgccgcgcgcgagcggatg
cgggccgccggcgatctcggcgatgacgtgcgcgtcacggtcgagcgcggcgcgcgcagc
ttcgcccgcggcgaccgcatcatgttcctgcaaaacgaacgcagtctcggcgtgaagaac
ggcacgctcggcaccatcgagcacgtcagcccgcaatccatcaccgtgcgcaccgacgac
gggctcagcgtctcgttcgacctcaaggattatgaccgcctcgaccacggctatgccgcc
accatccacaaggcgcaaggcatgacggtggaccgcacccacgtgctggcgacgccgggc
ctggacgcccattcgagctatgtcgcgctgtcgcgccaccgggccagtctggatctgcat
tacggccgcgacgacttcatcagcgaggaccggctcgtccgcacgctgtcgcgcgaccgg
gccaaggacatggcgtcggattacgcgcggcttgacccggcgcaaggctatgccgagcgg
cgcggcatcaccgtccgcgagcgcgttgccgagatcgtgcgtgccatcgtgccggacaag
gtgcgcggcatgttcgacggcctgcgcttgcccgtcgatggcggacaggcgtcggaaagg
gaaagacaaggggtggagcccgagcggcgcggcgcttttgccggattccggcccgatcgc
gccgtngcccgcgcgggacacaacgaccgaaaaatgctggcgcgggaccaggccgtgcaa
cgccacgcccgcgctctgactcgcatctgggacatgcaggacaaggaactgcctgtcctg
ccccaccagaaggtcgaacttcagaagacccgtcagaccctcgacgactacggcaagcat
gtcgcgcacgacatggaagccgcctatcgccgcgatccggccctggcccgcgagacagcg
gccggcggcgcgactggccgcgccatccaggccatgcatggcgagcgggaaatccgcctc
ggccatgagcgccgcgccgaagagtggatcgagacgttcaaggtcctcgaccaaaagagc
gtccgccagttcgacgccggaaactacggcggccaccgggacacccgcgcgctcatgtcc
gacatggccaaacaactcgaacgcgatccgcagctcgaatccatgatcgccatccgcaag
caggaactcggcctccagatcgagagcgcccggaagagcggcggcggcatcggccgggaa
ctggcccgcctctaccgcctcgaatgggaactcaaccgggggctcggactctag
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