Defluviicoccus vanus: HQ394_09935
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Entry
HQ394_09935 CDS
T06814
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dvn
Defluviicoccus vanus
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvn03032
]
HQ394_09935 (gyrB)
03400 DNA repair and recombination proteins [BR:
dvn03400
]
HQ394_09935 (gyrB)
Enzymes [BR:
dvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HQ394_09935 (gyrB)
DNA replication proteins [BR:
dvn03032
]
Prokaryotic type
DNA Topoisomerases
HQ394_09935 (gyrB)
DNA repair and recombination proteins [BR:
dvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HQ394_09935 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNT69588
UniProt:
A0A7H1N1K2
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All DBs
Position
2159741..2162185
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AA seq
814 aa
AA seq
DB search
MSERTRSKATAEVYDSTSIKVLRGLDAVRERPGMYIGDTDDGSGLHHMVYEAVDNAIDEA
LAGYCDTILVQLNADGSVTVNDNGRGIPVDIHQEEGVSAAEVIMTRLHAGGKFDQNSYKV
SGGLHGVGISVVNALSDWLDLTIWRDGSEYFMRFVRGEAEKPLAVAGPAPKKRGKPITGT
QLTFLPSAKIFKITEYDVATLEHRLRELAFLNSGVRLRLADARQVSPQAIDLHYEGGLAA
FLAYLDRSKTAVDRHPVVIKGERDGLVVEVALQWNDSYHETMLCFTNNIPQKDGGTHLAG
FRGALTRTVQGYAQQAVKKEKVSISGDDAREGLTCVLSVKVPSPKFSSQTKDKLISSEVK
PIVEEVVRERLDRWFEENPGDAKKVIGKIVEAASAREAARKARELTRRKGVFEVTTLPGK
LADCQERDPGKSELFLVEGDSAGGSAKQARNRANQAILPLRGKILNVERARFDKILSSGE
IGTLISALGTGIGRDDFDVGKCRYHKVIIMTDADVDGSHIRTLLLTFFFRQMQEIIERGY
LYIAQPPLYRVKRGSSEVYLKNEGALQEHLLAAVIDEGVVFTDGRGVQIAGKHLRELFDE
AKTLKGRLERLAQHVPLRILEQAAIMGLLDRQNLADRVHAEALARQVAERIDALEAPSER
GWTAVLPPDDGIVFARSLRGVAEKHIIDAALLDSSEARKLSEKADLLHQTYAQPATLQIK
DKLHPISGPAALVTMVVELGRKGVSIQRYKGLGEMNPDQLWQTTLDPEARTLLQVRINHA
DDAEEVFSTLMGDTVETRREFIESNALKVENLDV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcgcacccgaagcaaagccaccgccgaggtttatgactctacctcaatcaag
gttctgcgcggcctcgatgccgtccgcgaacgaccggggatgtacatcggcgacaccgac
gacggctccggcctgcatcacatggtctacgaggcggtggacaacgccatcgacgaggcc
ttggcaggctactgtgacactattctcgtccagctcaatgccgacgggtcggtcaccgtt
aacgacaacggtcgcggcattccagtcgacatccaccaggaagaaggcgtctcggcagcg
gaagtaatcatgacccgcctgcacgccggcggcaagttcgaccagaattcatacaaggtc
tcgggcggcctgcacggggtgggtatctccgtcgtcaacgcgctctccgattggctcgac
ctgacgatctggcgtgacggcagcgaatactttatgcgcttcgtgcgcggcgaagcggaa
aagccgctggcggtggctggtccggcgccgaaaaagcgcggcaaacccattaccggcacc
cagcttaccttcctgccatcggcgaagatcttcaagatcaccgagtacgatgtggcgacg
ctggagcaccggctgcgcgaactggcctttctcaattccggggtgcgcctgcgactggcg
gacgcgcggcaggtgtcgccgcaagcgattgatctgcactacgagggcgggttggcggct
tttcttgcctatcttgatcgctcgaagacngccgttgatcggcaccccgtcgtcatcaag
ggcgagcgcgacggcctcgttgtcgaggtagcgctgcaatggaacgacagttaccacgaa
accatgctgtgctttaccaacaacattccgcaaaaggatggcggcacccacctggctggc
tttcgcggcgcgctgacgcgcacggtgcaaggctacgcgcagcaggcggtgaagaaggag
aaggtctcgatcagcggcgacgatgcccgcgaaggcctgacctgcgtgctgtcggtgaag
gtgccgagccccaaattctcgtcgcagaccaaggacaagctgatttcgtcggaggtcaag
cccatcgtcgaagaggtggtgcgcgaacgtctcgaccgctggttcgaagaaaatccgggt
gatgcgaagaaggtgatcggcaagatcgtcgaggccgcttccgcccgcgaggcggcacgc
aaggctcgcgaactcacccgccgcaagggggtctttgaagtcaccaccctgccgggcaag
ctcgccgattgccaggagcgcgatcccggcaagagcgagttgttcctcgtcgagggcgac
tctgccggtggctcggcaaagcaggcgcgcaaccgtgccaatcaggcgatccttcccttg
cgtggcaagatcctcaacgtcgaacgcgcccgtttcgataagatcctcagttctggcgag
atcggcacgctgatctcggcgctaggaaccgggatcggccgcgatgatttcgacgtcggc
aagtgccgctaccacaaggtcatcatcatgaccgacgccgatgtggacggtagccacatt
cgcaccctgctgctcaccttcttctttcgccagatgcaggagatcattgagcgcgggtat
ctctatatcgcccagccgccgctctaccgggtgaagcgcggctcgtccgaggtctatctc
aagaacgagggtgcgttgcaggagcatctgctggcggcggtgatcgacgagggtgtcgtc
ttcaccgatggtcgcggggtgcagatcgccggcaagcacctgcgcgagttgttcgacgag
gcaaagacgctgaagggccggctggagcgcttggcgcagcatgtgccgctgcgcattctc
gagcaggcggcgatcatgggcttgctcgatcggcaaaacctggccgaccgggtgcacgcc
gaggccctcgcccggcaggtggcggaacgcatcgatgcgctcgaagcgccgagtgaacgg
ggatggacggccgtgctgccgccggatgacggcatcgtcttcgcccgcagtctgcgtggc
gtcgcggagaagcacattatcgacgcggcgctgctcgattccagcgaggcgcgcaagctg
agcgagaaagccgacctcctccaccagacctatgcccagccggcgacactgcagatcaag
gataagctgcatccgatcagcgggcctgcggcattggtgacaatggtggtcgaactggga
cgcaagggcgtcagcattcagcgctataaaggcctgggcgagatgaacccggatcaactc
tggcagaccaccctcgatcccgaagcgcggacgctgctgcaggtgcggatcaaccacgcc
gacgatgcagaagaggtgttttccaccctgatgggcgacaccgtcgagacccgccgcgag
ttcatcgaaagcaatgccctgaaggtagaaaacctcgacgtgtaa
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