Defluviicoccus vanus: HQ394_16435
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Entry
HQ394_16435 CDS
T06814
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HQ394_16435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvn03019
]
HQ394_16435 (recQ)
03400 DNA repair and recombination proteins [BR:
dvn03400
]
HQ394_16435 (recQ)
Enzymes [BR:
dvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQ394_16435 (recQ)
Messenger RNA biogenesis [BR:
dvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HQ394_16435 (recQ)
DNA repair and recombination proteins [BR:
dvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HQ394_16435 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNT70624
UniProt:
A0A7H1N4I8
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All DBs
Position
3580798..3582654
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AA seq
618 aa
AA seq
DB search
MASPATAIGDPLAVLEAVFGFKGFRPGQNEVITAVLAGEDVLAVMPTGSGKSLCYQLPAL
MRSGLTVVVSPLIALMQDQVGQLVGCGVAAASLNSAADPAENRRIVQAIRSGELRLLYVA
PERLTRPDTLDDLCRARIDLLAIDEAHCVSQWGHDFRPEYLALGQVRERLGGVQTIALTA
TADAPTRDDIAGKLFSRPPRTFVRSFDRPNLYLSMLPKANARRQLLGFLAARREQSGIVY
CASRKRTETLAALFNAEGFRALPYHAGLEPATRSANQSTFLRQDGVVMVATVAFGMGIDK
PDVRFVCHAEMPKTIESYYQEIGRAGRDGLAADTLTLYGLDDLQFRRRQIEDSELPEERK
RIEQHRLNALLALCEAPRCRRQTLLAYFGESSGPCDNCDLCLERPQIFEATIEAQKAMSA
ILRTGERFATEHLIALLTGEATEAIERYGHNTLKTFGVGKERSAGEWRSIFRQLYAAGVI
HLDIVRHGRWSVTEYGRRILRGEAAIQLRQDVLSGARPGRERGKAAKSPDLEAADPQLLA
ALKALRTELAGAQQLPAYVVFADRTLIEMAVLRPTSLTALRGVHGVGEEKLRRYGAAFLA
VLAAQPGAVVGRGRPAGD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccggcgactgcaatcggcgatccgctggcagtgcttgaagccgtcttcggc
ttcaaggggttccgtcccggccagaacgaagtcatcaccgctgttcttgccggcgaagac
gtgcttgcggtcatgcccaccggcagtggcaagtcgctctgctatcagctgccggcgctg
atgcgctccgggctcaccgtggtcgtctccccgctgattgccctgatgcaagaccaggtt
ggtcaactggtcggctgcggtgtcgccgccgcgagcctcaactccgctgccgatccggcg
gagaatcgccgcatcgtccaggcgattcgctcaggtgaactgcggcttctctacgtggca
ccggagcgcttgacccgtcccgacacccttgatgacctgtgccgggcgcggattgacctg
ctcgctatcgacgaggcgcactgcgtctcgcaatggggacatgacttccggcccgaatat
ctcgccctcggtcaggttcgcgagcggctgggtggggtgcagaccatcgcgctgacggcc
actgccgatgcgcccacccgcgacgacattgccggcaagctgttcagtcggccgccccga
accttcgtgcgctccttcgaccggccgaatctctacctctccatgctgccaaaggcgaat
gcgcgccggcagctgctggggtttctcgctgccagacgtgagcagagtggcatcgtctac
tgtgcgtcgcgcaagcggacggaaacgctggcggcgctgttcaatgccgagggatttcgc
gccctgccctatcacgccgggctggagccggcgacgcgcagtgccaaccaatcgaccttt
cttcgtcaggatggcgtggtgatggtggcaaccgtagcctttggcatggggatcgacaaa
cccgacgtccgcttcgtctgtcatgccgagatgccgaagaccatcgagagttactaccag
gagatcggccgtgccgggcgcgacggacttgccgccgacacgcttaccctctacggcctt
gatgatctccagttccgccgccgtcagatcgaagacagcgaattacccgaagagcgcaag
cggatcgagcagcaccggctgaacgcgctccttgccctgtgcgaagcgccgcgctgccgc
cgccagacgttgcttgcctatttcggcgaaagctcagggccgtgcgataactgcgacctc
tgtctggagaggccgcagattttcgaggcgacgatcgaggcacagaaggcgatgtcggcg
attctgcgcaccggtgagcgctttgccaccgagcacctgattgccctccttaccggcgaa
gccaccgaggcaatcgagcgctacgggcacaacacgctgaaaaccttcggcgttggcaag
gagcggagcgccggcgagtggcgctccatctttcgtcagctctacgccgccggcgtgatc
catctcgacattgtccgccacggccgctggagcgtaaccgaatacggtcgacgcatcctg
cgtggagaggcggcgatccaactgcgtcaggatgtgctgtcaggcgcgcggccgggacgc
gagcgagggaaagcggcgaagtcgcctgacctggaagcggcagatccgcagctgctggca
gcgctgaaggcgttgcgcacggaactggctggcgcgcagcagctgccggcctacgtggtg
tttgctgatcggacgctgatcgaaatggcggtgctgcggccgacgtcgctgacggcactg
cggggtgtgcatggcgttggcgaggagaagctgcgtcgctatggcgccgcgtttcttgcc
gtcctcgcggcgcaaccgggggccgtggtcggccggggccggcccgccggcgattga
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