Defluviicoccus vanus: HQ394_16775
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Entry
HQ394_16775 CDS
T06814
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn03030
DNA replication
dvn03430
Mismatch repair
dvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQ394_16775 (dnaE)
03430 Mismatch repair
HQ394_16775 (dnaE)
03440 Homologous recombination
HQ394_16775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvn03032
]
HQ394_16775 (dnaE)
03400 DNA repair and recombination proteins [BR:
dvn03400
]
HQ394_16775 (dnaE)
Enzymes [BR:
dvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQ394_16775 (dnaE)
DNA replication proteins [BR:
dvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQ394_16775 (dnaE)
DNA repair and recombination proteins [BR:
dvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQ394_16775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QNT70676
UniProt:
A0A7H1N4P0
LinkDB
All DBs
Position
3655564..3659055
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AA seq
1163 aa
AA seq
DB search
MTSTATFIHLRLHSAYSLSEGAIRIKELPKLCRARAMPAVAITDTNNLFGALEFSATLSG
GGIQPIIGCQLSLRPAAPATQPVASLPRGESATSSVVLLVQNRDGYANLLRLLEIAYTEP
ESSEGPQVTLAALLAHSAGMILLTGGTSGPVGRLLLDGKREQAAALLAELAAAFPDRLYL
ELMRHGLADEETIENALLELAQAQALPIVATNDVHFATPDLYEAHDALLCIAQGTVLTNP
ERRRLSPEHYLKSPAAMAELFADLPDAVGNTVRIARRCTFFLDQVKPMLPHFDCGPGRQE
EDVLRQQAAAGLEDRLVHHVLPPGLDEAQRAAAAKPYHERLTFELDVICKMGFAGYFLVV
AEFIQWAKQHEIPVGPGRGSGAGSVVAWALTITDLDPIRFGLLFERFLNPERVSMPDFDI
DFCQDRRDEVIDHVQKKYGVDRVAQIITFGKLQARAVLRDVGRVLGMPYGQVDRICKLVP
NNPAHPVTLEEAIKGEPQLQAMIAADETVARLVGIAKPLEGLYRHASTHAAGIVIANRPL
VELVPLYRDPRSPMMVTGFNMKWVEGAGLVKFDFLGLKTLTVLAKAVELLQRRRGIAIDF
SRMPLDDAGTYELLGRGDTVGVFQLESAGMRDVLRKLKPDKLEDIIAVVALYRPGPMDNI
PSYIRRKHGDEKPDYLHPDLEGILRETYGIMIYQEQVMQIAQVLSGYTLGGADLLRRAMG
KKIKEEMDKQRESFVTGATSRGVGGSRASHIFDLVAKFAGYGFNKSHAAAYALIAYQTAY
MKANYPYEFFAASMTLDLGNSDKLNGYRQELDRLQIPLLPPDINASDETFTVEYREASVA
EPLGVRYGLAAVKTVGMGAVTALVTERRARGPFRSLDDFSLRLDAKQLNKRQLENLARAG
AFDRINRNRRQVVDSAEVILRRAGASVAERESNQMGLFAGAAAEGPPPMQLAAMEDWSPL
ERLKEELDAIGFYLSAHPLDAYAAKLQKLGVTGSAELQRHPQAGAYTLAGTVLARRERSS
AKGNRYAFVQLSDPTGLFEITVFSDLLASRRELTEPGRAVLIRAQVQVEGESIRCTAQEL
EPIERAVAQLGSEVHIHIEHADAVMKVRDLLLKRPAGRDTIRLTACLEDGLEVVMRLPLR
VALGPDDLGRLAAIAGVQTVNSV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacggcgacctttattcaccttcgcctccacagcgcctactcgttgtccgaa
ggggcgatccggatcaaggaactgccgaagctctgccgggcacgggcgatgccggcggtg
gcgatcaccgacaccaacaatctgttcggtgcgctggagttttcggcgacgttgagcggt
ggcggcattcagccgatcatcggctgccagctcagcctgcggccggccgcgccggcaacg
caacccgtggcctcgctgccgcgcggcgagagcgccaccagcagcgtcgtcctcctggtg
cagaaccgcgacggttacgccaatctgctgcgcttgctggagatcgcctacaccgagccg
gagagttcggaaggaccgcaggttacgctggcggcgctgctcgcgcacagcgccgggatg
atcctgctcaccggcgggacgagcggaccggtggggcgcctgctactggacggcaagcgc
gagcaggcggcggcgttgcttgccgagctggccgcggcttttcccgatcgcctgtatctc
gagctgatgcgccatggcctcgccgacgaagagacgatcgagaacgcgctgctcgaactg
gcgcaggcgcaggcgctgccgatcgttgccaccaacgacgtgcatttcgccacccccgac
ctttatgaagcgcacgacgcgctgctgtgcatcgcccaaggcacggttctgaccaatccg
gagcgtcgccggctcagcccggagcattacctgaagtcgccggcggccatggccgagctg
tttgccgacctgccggacgctgtcggcaatacggtgcggatcgcccgccgctgcaccttc
ttcctcgatcaggtcaagccgatgctgccgcatttcgactgcggccccggccggcaggaa
gaggacgtactgcgccagcaggcggcagccggcctcgaagatcggctcgtgcatcatgtg
ctgccgcccgggctcgacgaagcgcaacgggcggctgccgcaaagccctatcacgagcgg
ctcacctttgagctcgacgtgatttgcaagatggggttcgccggctacttccttgtggtt
gccgagttcatccaatgggcgaagcagcacgagattccggtgggaccgggacgtgggtcc
ggtgccggctcggtggtggcctgggcgctgacgatcaccgacctcgatccgatccgcttc
ggtctgctgtttgagcgcttcctcaaccccgagcgcgtctcgatgccggacttcgacatc
gacttctgccaggaccgccgcgacgaagtcatcgaccacgtccagaaaaagtacggcgtc
gatcgtgtcgcccagatcatcaccttcggcaagctgcaggcgcgagccgtcctgcgtgac
gtgggtcgggtgctcggcatgccttatggccaggtggaccggatctgcaagctggttccc
aacaacccggcgcatccggtaacgctggaagaggcgatcaagggcgagccgcaactgcag
gcgatgatcgccgccgacgaaacggtggcgcgcctggtgggcatcgccaaaccgctcgag
ggactgtaccggcatgcatccacccatgccgccggcatcgtcatcgccaaccggccactg
gtcgaactcgtacccctctatcgcgatccgcgctcgccgatgatggtcaccggcttcaac
atgaaatgggtggagggagccgggctggtgaagttcgacttcctcggcctgaagacgttg
acggtgttggccaaggcggtggaactgctgcaacgccgacgcggcatcgccatcgatttc
tcccgcatgccgctcgacgatgccggcacctacgagcttctcggccgtggcgataccgtc
ggcgtgttccagctggaaagtgccggcatgcgcgacgtgctgcgcaagctgaagcccgac
aagctcgaagacatcatcgccgtggtcgcactctaccggccggggccgatggacaacatc
ccgagctacatccgccgcaagcacggcgacgagaaacccgactatctgcatccggatctg
gaaggcatcctgcgcgagacctacggcatcatgatctaccaggaacaggtgatgcagatc
gcccaggtgctgagcggctacacccttggcggcgccgacctgctgcgtcgcgccatgggc
aagaagatcaaggaggaaatggacaagcagcgggaaagctttgtcaccggagccacctcc
cgcggtgttggcggatccagggccagccatatcttcgacctggtggccaaatttgccggc
tacggcttcaacaaatcgcacgccgccgcgtatgcgctgatcgcctatcagacggcctac
atgaaggccaactatccctatgagttctttgccgcgtcgatgaccctcgatcttggcaac
agcgataaactcaacggctaccggcaggaactcgatcggctgcagatcccgctgctgcca
cccgacatcaacgcttccgacgaaacgttcactgtcgaataccgggaggcgagcgtcgcc
gagccactgggggtgcgttatggtctcgcggcggtgaagacggtggggatgggggcggtc
actgccctggtgacggaacgccgcgccagggggccgtttcgctcgctcgacgacttctcg
ctgcggctcgacgccaagcagctcaacaagcgccagctggaaaatctcgcccgtgccggt
gcgttcgatcgcatcaaccgcaaccgccgccaggttgtcgacagtgccgaggtgatcctg
cgccgggcgggtgcgagtgtggccgaacgggaaagcaatcagatgggtctgtttgctggc
gccgccgccgaagggccaccgccgatgcaattggcggcgatggaggactggtcgccactg
gagcgattgaaggaggagctggacgccatcggcttttacctctcggcgcatccgctggac
gcctacgccgccaagctgcagaagctgggcgtcaccggcagcgctgagctgcagcggcat
ccccaggcgggtgcgtacaccctcgccggaactgtgctcgcccggcgggagcggtcctcg
gccaagggcaaccgttacgccttcgtccagctctccgatccaaccggactgtttgaaatc
accgtgttctcggatttgttggcgagtcgcagggagctgaccgagcccggccgggcggtg
ctgatccgcgcccaggtacaggtggaaggcgagtctatacgctgtacggctcaggaactg
gaacccatcgagcgcgcggtggcgcagttgggcagtgaggtgcatatccacatcgagcat
gccgacgcggtaatgaaggtgcgtgatctcctcctcaagcgtccggcgggacgagacacc
atccggctcaccgcctgtctggaggatgggctggaggtggtcatgcggctgccgctgcgt
gtggcgctggggccggacgatctcggccggctggccgccatcgccggtgtgcagacggtc
aacagcgtctag
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