Defluviicoccus vanus: HQ394_17545
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Entry
HQ394_17545 CDS
T06814
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dvn
Defluviicoccus vanus
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvn03021
]
HQ394_17545 (rpoH)
Transcription machinery [BR:
dvn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HQ394_17545 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_11
DUF6561
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QNT71412
UniProt:
A0A7H1N6S6
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All DBs
Position
3812918..3813775
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AA seq
285 aa
AA seq
DB search
MTPDRNLARYLQQIRKFPMLSPEEEQELAIRWVEQGDVQAAHTLVTSHLRLVAKIAMGYR
GYGLQLSELISEGNVGMMQAVMRFDPSRGFRLATYSMWWIRAAIQEYILHSWSLVKMGTT
AAQKKLFFNLRKLKGQMQAIEDGDLLPEHVTSIATRLNVPEIDVVQMNRRIGNPDTSLNA
PLREEGEGEWQDWLVDNDDGQEIRLANSEEMHSRRELLEGAMRSLSERERQILAERRLKE
NPTTLEHLSQRYGISRERVRQIEVRAFEKLQKSVKNAVIEQRLTH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggatcgcaacctcgcccgatatcttcagcagatccgtaaatttcccatgctc
agccccgaagaggagcaggagctggcgattcgctgggtggagcagggcgacgtacaggca
gcgcacacgcttgttaccagccacctccgtctcgtcgccaagattgcgatgggttaccga
ggctatggcctgcaactgagcgagctgatctcggaaggcaacgtcggcatgatgcaggcg
gtcatgcggttcgaccccagccgcggctttcgcttggcgacctacagcatgtggtggatc
agggcggcgatacaggagtacatcttgcattcctggtcgttggtgaaaatgggaacgacg
gcggcgcagaagaagctgttcttcaacctgcgcaagctcaagggccagatgcaggcgatc
gaagatggcgacctactgccggagcacgtcacctccatcgcaacccgtctgaacgtcccc
gaaatcgacgtggttcagatgaatcggcgcatcggcaatcccgatacgtcgctgaatgca
ccgctgcgtgaagaaggcgaaggcgaatggcaggactggcttgtcgacaacgatgacggt
caggaaatccggctcgccaattcagaagagatgcattcgcggcgggaacttctggaaggg
gcgatgcggtcgctgtccgagcgtgagcggcagatacttgccgagcgccgcctgaaggag
aatccgacgacactcgaacacctcagccagcgctacggcatcagccgcgaacgcgtgcgg
cagatcgaggtgcgcgcgttcgaaaagctgcagaaatcggtcaagaatgcggtgatcgag
cagcggctgacccattga
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