Defluviicoccus vanus: HQ394_18940
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Entry
HQ394_18940 CDS
T06814
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn03030
DNA replication
dvn03430
Mismatch repair
dvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQ394_18940
03430 Mismatch repair
HQ394_18940
03440 Homologous recombination
HQ394_18940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvn03032
]
HQ394_18940
03400 DNA repair and recombination proteins [BR:
dvn03400
]
HQ394_18940
Enzymes [BR:
dvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQ394_18940
DNA replication proteins [BR:
dvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQ394_18940
DNA repair and recombination proteins [BR:
dvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQ394_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
HisKA
PAS_4
DEDDh_C
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QNT71004
UniProt:
A0A7H1N5L8
LinkDB
All DBs
Position
4112143..4114278
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPRNVLAICFAAFAAAVIAAVAVAVLLVIVRLPEAAAQLTTIIVIYGGGLAVVLVTVI
VLLWAYMDRAFTQPLVSMVRGIQTAIHANYQHRINIEEGHQLGGLPSAVNELIRQIALAR
ISTSEAIAAATTKVETQKNQLATVLRDLHEGVIVCSLDHRILLYNARALALLHIGGDIGL
DRSMFRFMTRQPIEHALGGLTRRLSDGDYRGHADRLTAPFVVATTDGRHMLQGRIGLILD
AEGKASGYVLSFEDRTDDLATIGRRDRLLRDATEGLRAPMANLRAAAEILSSGAAMALDE
QDGFKRVVLQESYQLSSHVEQLASQYRDLVTGHWPMSDIYSPNLLHSLERRLREQRDISM
TIVGLPAWLRGDSYSLLELLDRLIVRVGGYIGAGSFEVEATAGDSHVYIDVIWNGKVVPT
HELGHWLADTVDDALGGLSLEEILQRHRTDVWSLAYDADRAQLRLPLTPANRKPRTRRAE
LPQRPEFYDFDLLHRDLLHRPAIADARGSLPLTSLNYVAFDTETTGLKPLQGDEIVSIAG
VRIVNGRILTGESFERLVDPKRPIPXQESIRFHGITEAMIADKPPIAVVLPQFRAFVGDG
VLVAHNAAFDMKFLQQKEAESGIAFTGPVLDTLLLSAYLHDHTHQHGLDAVADRFGVPVQ
GRHTALGDTLVVAGIFIKMINLLAARGVVTLDEALAVSEKMVEIRRRQEAL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaatccgcgaaacgtcctggccatctgcttcgccgcctttgccgcggcagtgatc
gcagcggtggcggtggctgttttgctggtcatcgtccggctgccggaggcagcagcccaa
ctgaccacgatcatcgttatctacggcggcggtttggcggtggtcctggtgaccgtcatc
gtcctgctctgggcctacatggaccgcgcctttacccagccgctggtgagcatggtccgt
ggcatccagaccgccattcatgccaactatcagcatcgcatcaatattgaggagggccac
cagctgggtggcctgccaagcgccgtcaatgagctgatccggcagattgcgctcgcccgg
atcagcaccagcgaggcgattgccgcggcgacgacaaaggtggagacgcagaagaaccag
ctggcgacggtgcttcgcgacctgcacgagggggtgatcgtctgctctctcgatcatcgc
atcctgctctacaacgcccgtgcgttggcactcctgcatatcggcggggatatcgggctt
gaccgctccatgttccgcttcatgacccgccagccgatcgagcacgcgctcggcggattg
acgcgccggctcagcgatggcgactaccgcggtcatgccgatcggttgactgcccccttt
gtcgttgccaccaccgatggccggcacatgctgcagggccgtatcggcctgatccttgat
gccgaaggcaaagcgtccggctatgtcctctccttcgaggatcgcaccgacgatctggcg
accatcggccgccgcgaccggcttctgcgcgatgcgaccgaagggttgcgcgcacccatg
gccaacctgcgggcggcggcggaaattctgtccagtggtgcggcgatggcactcgatgaa
caagatggtttcaaacgcgtggtgctgcaggagagctatcagctgtcatcgcacgttgag
cagttggcgtcgcaatatcgggatttggtcacggggcattggccaatgtccgatatttat
tcgccgaacctgttgcatagcctggagcggcgattacgcgaacagcgcgatatcagcatg
acaatcgtcgggctgccggcttggctgcgcggcgactcctattcgctgttggaattgctc
gatcggctgattgtccgggtgggcggctacatcggcgcagggagctttgaagtggaggct
accgccggcgattcgcacgtctacatcgatgtcatttggaacggcaaggtggtgccgacg
cacgaactcggccactggcttgccgacactgtcgatgacgcgttgggtgggctcagcctt
gaggaaattctgcagcggcaccgcaccgacgtttggagcctggcgtacgatgccgatcgg
gcgcagctgcggctacctctgacgccagctaaccgcaagccgcggacgcggcgcgccgag
ttgccgcagcgtcccgagttttatgacttcgatctgctgcaccgggatctgctgcaccgg
ccggcaatcgcggacgcccgtggcagtctgccgctgacgtcgctgaactacgttgccttc
gacacggaaaccaccggtctcaaaccgctgcagggggatgagatcgtctctatcgctggc
gtccgcatcgtcaatggacgcatcctgaccggggaaagctttgagcggctggtcgatccg
aagcgaccgataccanngcaggagtcgatccgttttcacggcatcaccgaggcgatgatc
gccgacaagccgccgatcgccgtcgtgctgccgcagtttcgcgccttcgttggcgatggc
gtccttgttgcccataacgccgccttcgatatgaagtttctgcagcagaaggaagccgag
agcggaattgccttcaccgggccagtgctcgacaccctgctgctgtcagcctacctgcat
gatcacacgcatcaacacggtctcgatgcggtggcggatcgtttcggcgttccggtgcaa
gggcgtcacaccgccctcggcgacacgctggtcgtcgccggcatattcattaaaatgatc
aacctcctggcggcacggggagtcgtcaccctcgacgaagcgctcgccgtatcggagaag
atggtcgagatccgcaggcggcaggaggccctgtaa
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