Desulfosarcina variabilis: Dvar_01030
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Entry
Dvar_01030 CDS
T10869
Name
(GenBank) Rng: ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvr03019
]
Dvar_01030
03009 Ribosome biogenesis [BR:
dvr03009
]
Dvar_01030
Messenger RNA biogenesis [BR:
dvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dvar_01030
Ribosome biogenesis [BR:
dvr03009
]
Prokaryotic type
rRNA processing factors
Dvar_01030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF5351
Motif
Other DBs
NCBI-ProteinID:
XPS82085
LinkDB
All DBs
Position
117247..118812
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AA seq
521 aa
AA seq
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MYKKIIINVFDHETRVALVEDETIAELFIERKGSRDSTGNIYKGRVQRVLPGMQAAFVDI
GLNQAAFIYVDDVIRNDYKDIEEHFSCNDIDEENSINEDQEAADVSFSIDTKSNDTQHDN
IEDLITEGQEILVQVSKSPIGTKGARITSNISLPGRFLVLMPTSSHIGISRRIEDEGERQ
RLKDIVTELAQNSSMGYIVRTAGEGVQKEKIAYEMGFLKNLWGNIQKKYQTAGTPSLLHQ
ELNLSLRAVRDLLIQEAEKLVIDSRKDYESVLNFLDTFNPSLKESVELYDGKEPIFDAYN
LEGDISRALKRKVWLKSGGYIVIEHTEALVAIDVNTGRYVGKHNLEETILKTNLEAVKEI
AYQIRLRDIGGIIIIDFIDMEKKSNQEKVFSALNEAFTKDRSKTHILPISEMGLIQMTRK
RTRKPLTRLLCDPCPYCDGEGYIISIKTICYGIFREILRYAADMVGSKLTVRVNPEVAEF
LHGEENRLIPGLEKTITKQIIIYPDNRYHMEAFEIIESSTN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaaataatcattaatgttttcgaccacgaaactcgcgttgcactcgtggaa
gatgaaaccatcgcggaattgttcattgaaaggaaaggaagcagggatagtaccggaaat
atctacaagggccgggttcagcgggtgcttccgggaatgcaagcggcttttgtcgatatt
ggactcaatcaggcggccttcatttatgtggatgatgtaatacgaaatgattacaaagac
atagaagaacacttcagttgtaacgatatcgatgaagaaaacagcatcaatgaagatcag
gaggccgccgatgtatccttttccatcgacaccaagagcaatgacacccagcatgacaac
attgaggatctgattaccgagggacaggaaatcctggttcaggtctccaaatcaccgatt
ggaaccaagggtgccagaatcacatccaatatatcattgcctggtcgatttttggtgttg
atgcccacctcttcacacattggtatttcaaggcgaatcgaggatgagggcgagcgccaa
cggcttaaagatattgttaccgaactggcgcagaacagttccatgggctatattgtcaga
acggcgggagaaggtgttcagaaggaaaaaattgcctacgaaatggggtttttaaaaaac
ctgtggggcaacattcaaaaaaagtatcagaccgccggcacgccgtctttattgcaccag
gaattaaatctcagtctcagagcggtcagggatcttctaattcaggaggccgaaaaattg
gtcattgattcccgaaaagactatgaatccgtactcaattttttggatacgttcaacccc
tccttaaaagagtctgttgagctatatgatggaaaagaacccatttttgatgcctataac
ctagaaggggatatttcacgggcactgaaaagaaaggtgtggcttaaatcaggcgggtat
attgttattgaacacaccgaagccttggtggcgatcgacgtgaatacagggcgttatgtg
ggaaagcacaatcttgaagaaaccatattaaaaaccaacttggaagcggttaaagaaatc
gcctaccagatccgattaagggatatcggaggaatcattatcattgatttcatcgatatg
gagaaaaaatcgaatcaggaaaaagtattttcggcgcttaatgaagcgtttaccaaagac
cgcagtaaaacccatatacttcccatttctgaaatggggctgattcagatgacacgcaaa
cgaactcgcaagccgcttacccgactattgtgtgatccctgcccctattgtgatggggaa
ggttatataatatcaataaaaacaatatgttatggtatttttagggagatattgaggtac
gcggcggatatggtggggtcaaaactgacggttcgggtcaatccagaagttgctgaattt
cttcatggtgaagaaaacagactgatacccggattggaaaaaaccattaccaaacagatc
atcatctatcccgacaatcggtaccatatggaagcgtttgaaattattgagtcatcaaca
aattga
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