Desulfosarcina variabilis: Dvar_03320
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Entry
Dvar_03320 CDS
T10869
Name
(GenBank) sigma54-dependent transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dvr Desulfosarcina variabilis
Brite
Transcription factors [BR:
dvr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dvar_03320
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XPS82314
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Position
complement(366000..369167)
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AA seq
1055 aa
AA seq
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MMKSETQSSNVLERIWQSLSEEEANIIIAIAFASHPVSIDTLGVLSGASAVSILNVTDLL
KKKKLVYENKDLPRGNYFVNGTDIESFLLNHVSAENLQPIIVKAIDFYDRNLKPGNQKTL
KIASLYHKFGPHKKSYEVIRKAAKLLLSDNQREKAVIYFDYLIEHLGGETLTDTNVNIIL
DGLFGKFKATTHLIPIQKQLSLLNQAEKIAKDFQKWKYLTSIELELGKLLQGAGQHEKAY
QHMEDFWKLAAHIGDPHMLKMATLLTSDYTHWKGKFKEAVRRYEEVVEDLEEFSNDGAIL
KATARIGLCFVRCGRIARGLGMIETARAKAMRLNFQHISIFADLMAIMALFEIRKLSEVK
VYIDRISALPEEVTGHYVLWPIESCKAYLLCQEKKYQEAFECLKRAVEHSRSIGWIHQNG
AWNFDCLDILESKGFIDPELNYDNEIKRMLSWDDIYTKGIAYRYRALRKIAGNQKKDSIL
SDLNNSEIYLKEAGAVFELARTQICLGNYLINRGATKQGKTHLENAWACLPKVDKELFPP
DLLFIMPQEQKIKVMIDRMVDINQLLGTVHDASPFIERSLAVAMEFTGAMRGAFFSNEPD
GQPTALASRNLDPLILKTEAPDLIRQVISDVAGKGKELVYPSPEGEIKAYRKPFEAAGIF
SFICMAAMLGEKTYGFLYIDNHIGGKAFPEQHLLYMRLLCSQIAVGLFNIKILDEVKEKK
DRLKDEAIFYKREMGVASPLETIIGKSKKISAVLDQIQQVAGSDSSVLIEGETGVGKELV
AKAIHNLSDRKNGSFIPVNLAALPQELVASELFGHAKGAFTGANEGYKGRFELADKGTIF
LDEIGDLPANIQVKLLRVLQEGTFQRLGSSQIIQSNFRVIAATNKDLLAAIKKGDFRQDL
YFRLNVFPIHIPPLRDRKMDIPLLSQHFLNKFSKESGKPFNYIPKAEMKKLISYSWPGNV
RELEHIIERAVIVSKGDRVNIDVFNALSYSSIEEENQSIQTLSEIEKAHILKALQATRWK
VGGPDGAAELLGLKPTTLFFRMKKLGINRRRRVMK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaaaagcgagacacaatcttctaatgtgctggaacgaatctggcaatcgcttagc
gaggaggaggcaaatattatcatcgccatcgctttcgccagccatcctgtcagcatcgat
acactgggtgttctatccggagcttcggcagtcagtatcttaaacgtcaccgatcttctg
aaaaaaaagaaattggtatatgaaaacaaagatctgcccagaggaaattattttgtaaat
ggcacggatatcgagtcatttctgctcaatcatgtctcagcggaaaatttacaacccatc
atcgtaaaggccatcgatttttatgatcgaaacctgaaacccggaaatcaaaaaacgctt
aaaattgcatcgctttatcataaatttggccctcacaaaaaaagctatgaggtaatcagg
aaagcggccaaactccttcttagcgacaaccagagagaaaaagcggtcatttactttgat
tatttgatcgaacaccttggcggcgagaccctgactgataccaatgtgaatatcattctg
gatgggctcttcggaaagttcaaagcaacaacgcatctcattcccattcagaaacaactc
tcactgctgaatcaagcggaaaaaatcgccaaggatttccagaaatggaagtatcttacc
agcatcgaactggaattggggaagctgcttcagggagcagggcagcatgaaaaagcatat
caacatatggaggatttctggaaactggccgcacatattggtgacccacacatgctcaaa
atggccacccttttgaccagtgattacacccactggaaaggaaaattcaaagaggccgtt
cgccgctatgaagaagttgtcgaagaccttgaggaattcagcaatgacggcgccattcta
aaagcgaccgccagaatcggactgtgctttgtccgttgcggtagaattgcccgcggactg
ggaatgatagagactgcccgtgcaaaagcgatgcgccttaattttcagcacatttccatc
tttgcggatcttatggcaatcatggcgctttttgaaattcggaaactatccgaagtcaaa
gtatacattgaccgcatcagcgctttgccggaagaagttaccggtcactatgtgctttgg
cccatagaatcctgtaaagcatatcttctatgtcaagaaaagaaataccaggaagcgttt
gaatgcctgaaaagggcagttgagcactcacgatcgatcggctggattcaccaaaatggt
gcatggaacttcgattgtcttgacatcctggaatcaaagggcttcatcgacccggagctg
aactatgataatgaaatcaagcggatgttatcctgggatgacatctatacaaaagggatc
gcctatcgctacagagccctgcgaaagattgccggaaatcaaaaaaaggatagcattctt
tccgatctgaataatagtgaaatctatctgaaagaggccggtgccgtttttgaactggca
cgcactcagatctgtctgggaaattatctgattaaccggggagcaacgaaacagggaaaa
acgcaccttgaaaatgcctgggcatgcttaccgaaggtggacaaagagttgtttccacca
gatctcttgttcattatgccgcaggaacaaaaaataaaggtgatgatcgatagaatggtc
gacattaatcaactcttgggtactgttcatgacgcctcgcctttcattgaacggtctctt
gccgttgccatggaatttaccggcgcgatgcgaggggcatttttttcaaatgaacccgat
ggtcaacccactgctttggccagcagaaaccttgatcccctgatattaaaaaccgaagcg
cccgatctgattcgacaggtcatttcagacgtggcgggtaaagggaaagaattggtttat
ccaagcccggaaggagaaatcaaagcataccggaagccgtttgaagcggccggaattttc
tcttttatatgtatggccgcgatgctgggtgagaaaacctatggatttttatacatcgac
aaccatattggagggaaagcgttccccgagcagcatttattatacatgagactgctttgc
agtcagattgcagtgggcttgttcaatattaaaattctggatgaggtgaaagaaaagaaa
gatcgcctgaaagatgaagcaatcttttacaagcgtgaaatgggcgtggcatcccctctt
gaaaccatcatcggcaaatccaaaaaaatttccgccgtgctggatcagatccagcaggtt
gccggaagtgacagttcggttttgatcgaaggagaaaccggcgttggcaaggagcttgtg
gccaaggccattcacaatctcagcgaccgcaaaaacggttcgttcatcccggtcaacctg
gctgcattgccacaggaacttgtggccagtgaactttttggtcacgcaaaaggcgcattc
accggcgccaacgaagggtacaaggggcgatttgaactggctgacaaaggcaccatattt
ttagatgaaatcggtgacctaccggcgaacatccaggtaaaactgcttcgcgtcttacag
gaaggaacgtttcaacgcttgggcagctcacagatcatccagtcgaacttccgggtaatt
gcggccacgaacaaggacctgttagcagcgattaaaaagggtgatttccgccaggatctt
tattttcgtctgaacgtcttcccgattcatattccgccgctgcgcgatcgcaaaatggac
atcccccttttatctcaacattttttaaacaaattcagcaaagaaagcggtaaaccattc
aattatatcccgaaagcggaaatgaaaaaattaatatcgtattcatggccaggaaacgtc
agggaattagagcacatcattgaacgggcggtgatcgtctctaagggagatagagttaac
attgatgtgtttaacgcgctatcatacagttcaattgaagaagagaatcagtctatccag
acgttgtcggaaattgaaaaagcgcacattcttaaagcacttcaggcaacacgatggaaa
gttggcggaccagatggggcagccgaattgctcggcctcaaacccacgacactttttttt
agaatgaaaaagctgggtattaatcgacggcggcgtgtgatgaagtga
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