Desulfosarcina variabilis: Dvar_03800
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Entry
Dvar_03800 CDS
T10869
Name
(GenBank) transcriptional regulator, GntR family
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
dvr Desulfosarcina variabilis
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvr03000
]
Dvar_03800
Transcription factors [BR:
dvr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Dvar_03800
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
TrmB
Rrf2
Fe_dep_repress
HTH_24
HTH_Crp_2
HTH_11
HTH_36
HTH_41
MarR
DUF4423
HTH_17
TFIIE_alpha
HTH_IclR
MarR_2
DnaD_N
HTH_DeoR
HTH_20
MksE
HTH_27
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
XPS82362
LinkDB
All DBs
Position
415411..416118
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AA seq
235 aa
AA seq
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MSIRLKPINRQRISDQVLDQLRRLILNGELKPGQKVMTERDLADALNVSRNSIREAINKL
VAMGFMEQRQGQGTFVCSVDDAVKIPLGTVMEAQEASLVDLLEMRMGIECNSAAMAARRA
NAQDLAAMEAALAEMAADITGGGLGTGGDLAFHMAIAGATQNPMQIYIMKNVIDYLHMGI
SENLFHLYEDPQNISTILKQHQAIYEAIRSGNADDAFQAMKNHIDFVIEFFEAWE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcgacttaaaccgatcaatcgccagcggatttccgaccaggtgcttgaccag
ctgcgcaggctgatcctcaatggggaactcaaaccgggccagaaagtgatgaccgaacgg
gatttggccgacgccctgaacgtcagccgcaattcgattcgcgaagccatcaacaagctg
gtcgccatggggttcatggaacagcgccaggggcagggaacgtttgtctgctcggtcgac
gatgcggttaaaattccgctgggcacggtcatggaagcccaggaggccagcctagtggat
ctgcttgagatgcgtatgggaatcgaatgcaattccgccgccatggccgccagacgggcc
aatgcccaagaccttgcggccatggaagcggcccttgcggaaatggccgccgacatcacc
ggcggtgggttgggtaccggcggagaccttgcctttcacatggccattgccggggccacc
cagaatcccatgcagatctacatcatgaagaatgtgatcgactatctgcatatggggatc
agcgagaacctgtttcacctgtatgaagatccccaaaacatctccaccatcctcaaacag
caccaggctatttatgaggcgatccgtagcggcaatgccgatgatgcattccaggccatg
aaaaatcacatcgactttgtgatcgagtttttcgaggcctgggaatag
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