Desulfosarcina variabilis: Dvar_04340
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Entry
Dvar_04340 CDS
T10869
Name
(GenBank) HbsA1: benzylsuccinate synthase, subunit alpha
KO
K07540
benzylsuccinate synthase [EC:
4.1.99.11
]
Organism
dvr Desulfosarcina variabilis
Pathway
dvr00623
Toluene degradation
dvr01100
Metabolic pathways
dvr01120
Microbial metabolism in diverse environments
dvr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dvr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00623 Toluene degradation
Dvar_04340
Enzymes [BR:
dvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.11 benzylsuccinate synthase
Dvar_04340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
XPS82416
LinkDB
All DBs
Position
482535..484961
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AA seq
808 aa
AA seq
DB search
MPITERTKRLKERCRFKHVAGGEYVDPAVRAGIERARYITQAHKDHVGEATPILRARQLE
NVITNMAIHIQEDELIVGANTEHPDYFPLYPELSYFATIDMVESPYCQNKEEMREIAEYW
RPYTIQTKGEKYFSEEELDVAYSATIVQPPMFVTAFSSIMPNYESILEDGLEKRIEAVEA
KIEEANAQLRESPWVAKDNLPLLNKIDKWRAMVMADKAVMAWAQRYSRLAKIIAENFEDD
DRRCDELMEISDICRQVPAKPPRGLRDAMQCKWFTYLICHSIERYASGYGQKEDKILWPY
YKMSVIEGSGQPMTREEAQELFECERLKVSEHGSTKGRQLREFFAGANDLFILTIGGLNA
DGSDGCNDCTDAILDAAASMKTTEPSIGFRWNAKGRTQTKRKVFECIRKGMGFPSIKHDE
NGINQLMNYFNVPEEKANEWALVLCMSPGITGRRGTQKSRTEGGEDIYPGKLLELALADG
YDHFFTDMQLGPKTGDASRFESIDDLWEAFQLQTRYSIDLALRAKDISRTLEATYLPCPF
ISSLDDGCVEKGMNDTEIAEVPNPWHNMNTGSTCVIDSFAAIQKLVFDEKKYTMEQLVKA
LQANWEGCEEMRQDFWNAPKFGNDDDYADEWGKRYYNLMADEFSRVRTYSGTYPLPLAQS
VAGYIVNGPKTGALPNGRHGGEALDDGGISPYMGCDVKGPTAVLKSVAKAPHKRFKGMLL
NQRMAPAMMNAEGGFELWHAYMKTWHELGCDHVQFNVVSTDELRAAQKEPEKNTDTIVRV
AGYSAKFIDLAAFSQETIIARTEHELER
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccgattactgaaagaacaaagcgattgaaggaacgctgtcggtttaaacatgtggca
ggcggggaatatgtcgatccggcggtgcgtgcgggaattgaacgggcacgctatattacc
caggcccataaagaccatgtcggagaggccacccccattttgagagcccggcaactggaa
aatgtaatcaccaacatggccatccacattcaggaagacgaattgatcgtgggcgccaac
accgagcatccggactatttccccctatatccagaactgtcgtattttgccacgattgac
atggtggagagcccctattgccagaataaggaagagatgcgtgaaattgccgagtactgg
cggccttacaccattcagaccaagggcgaaaaatattttagcgaggaagaactggacgtt
gcctattctgcaaccatcgttcagccgcccatgttcgttaccgctttctccagtatcatg
cccaactatgagagcattctggaagacggactggaaaagcgtattgaagccgttgaggcc
aaaatcgaagaagccaatgcccagctgcgcgaaagtccctgggtggccaaggacaatctg
cccctgctaaataaaatagataaatggcgggccatggtcatggccgataaagccgtcatg
gcttgggcacagcggtattcgcggctggccaagatcattgccgagaatttcgaggatgat
gaccggcgatgtgacgagctgatggaaatttcggatatctgccgtcaggttcctgccaag
ccgccgcgaggattgcgtgatgccatgcaatgcaaatggttcacctatttgatctgccat
tccatcgaacgttacgcctccggttacggccagaaggaagacaaaatactctggccctat
tacaaaatgagcgttatcgagggcagcgggcagcccatgacccgtgaagaggcccaggag
ttgttcgagtgcgaacggctgaaggtgtccgaacacggcagcaccaagggccggcaattg
cgggagttttttgccggtgccaatgacctgttcattctgaccattggtgggctcaacgcc
gacggcagcgacgggtgtaacgactgcacggatgccatcctggatgccgcggccagcatg
aagaccactgagccgtcaatcggtttccgctggaacgcgaaaggccggactcagaccaaa
cgcaaagtcttcgagtgtatccgcaaaggcatgggtttcccttccatcaaacacgatgaa
aacggaattaatcagctgatgaactactttaacgtgcccgaggaaaaggccaacgagtgg
gcgttggtgctgtgcatgtcaccaggcatcaccgggcgccgcggcacgcagaaaagccgt
accgagggcggagaggatatctaccccggcaagttgcttgaactggcattggctgacgga
tatgatcactttttcaccgacatgcagctgggacccaagaccggtgatgcatcccgcttc
gagtcgatcgatgatctctgggaggcctttcagttgcagacgcgctattccattgatctt
gccctgcgggccaaggacatcagtcgaaccctggaggccacctatctgccgtgtcccttc
atatccagtttggacgacggttgtgtcgaaaaaggtatgaacgacaccgagatcgccgaa
gttcccaatccgtggcacaacatgaataccggcagcacctgtgtgatcgattcctttgcc
gccattcagaagctcgtttttgatgagaagaagtacaccatggagcagcttgtaaaggcc
ctgcaagccaattgggaaggatgtgaagaaatgcgtcaggatttttggaacgcaccgaaa
ttcggcaatgacgatgattacgccgatgagtggggcaagcgttactacaacctgatggcc
gacgagttctcccgtgtgcgtacgtattccggtacgtatcccctgccattggctcaatcc
gtggccggttacattgtcaatggaccgaaaacaggcgccttgcccaatggtcggcacggc
ggagaggcattggatgacggcggcatttccccctatatgggatgtgatgtcaagggaccc
acggcggtattgaaatcggtagccaaggcaccgcacaagcgtttcaagggcatgttgctc
aaccagcgcatggccccggccatgatgaacgccgaaggtgggtttgaactgtggcatgcc
tacatgaaaacctggcacgaactggggtgcgatcatgtgcagttcaatgtcgtttccacg
gatgaattgcgggcggcccagaaggagccggagaaaaataccgacaccattgtacgggta
gccggttacagtgccaagttcattgacctggcggccttttcccaggaaacaatcatcgcc
cgcacggagcacgagctggaacgctga
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